RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 SLC13A5Q86YT5 568 aaPredicted RBP9.18□□□□□ -0.94
UBA3-208ENST00000465627 CTAGE4Q8IX94 777 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 TCEAL8Q8IYN2 117 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 RCOR2Q8IZ40 523 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 ZNF276Q8N554 614 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 PRELID2Q8N945 189 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 STKLD1Q8NE28 680 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 FAF2Q96CS3 445 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 MYRFLQ96LU7 910 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 NCAPGQ9BPX3 1015 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 ANLNQ9NQW6 1124 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.18□□□□□ -0.94
UBA3-208ENST00000465627 DDX56Q9NY93 547 aaKnown RBP9.18□□□□□ -0.94
UBA3-208ENST00000465627 RRN3Q9NYV6 651 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 EFR3BQ9Y2G0 817 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 MYO7AQ13402 2215 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 DENND4CQ5VZ89 1909 aa9.18□□□□□ -0.94
UBA3-208ENST00000465627 hCG_1818297A0A087WSY0 165 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 RNF223E7ERA6 249 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 C2CD2LO14523 706 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 RNF8O76064 485 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 ZRANB2O95218 330 aaKnown RBP eCLIP9.17□□□□□ -0.94
UBA3-208ENST00000465627 C1RP00736 705 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 PDGFBP01127 241 aaPredicted RBP9.17□□□□□ -0.94
UBA3-208ENST00000465627 FGGP02679 453 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 KRT7P08729 469 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 KDELR1P24390 212 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 SLC19A1P41440 591 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 CXCR3P49682 368 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 ARPP19P56211 112 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 YWHAGP61981 247 aaKnown RBP eCLIP9.17□□□□□ -0.94
UBA3-208ENST00000465627 ATP11AP98196 1134 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 UBE3AQ05086 875 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 SCAPQ12770 1279 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 SEMA3BQ13214 749 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 MTMR3Q13615 1198 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 DPYSL2Q16555 572 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 CA9Q16790 459 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 ERCC6LQ2NKX8 1250 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 DCAF6Q58WW2 860 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 KIAA1841Q6NSI8 718 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 SPOCD1Q6ZMY3 1216 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 DENND5BQ6ZUT9 1274 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 MON1AQ86VX9 555 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 PSTKQ8IV42 348 aaKnown RBP9.17□□□□□ -0.94
UBA3-208ENST00000465627 SCN4BQ8IWT1 228 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 C12orf50Q8NA57 414 aaPredicted RBP9.17□□□□□ -0.94
UBA3-208ENST00000465627 MNS1Q8NEH6 495 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 NTAN1Q96AB6 310 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 FAM149B1Q96BN6 582 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 ACSF2Q96CM8 615 aaPredicted RBP9.17□□□□□ -0.94
UBA3-208ENST00000465627 C17orf80Q9BSJ5 609 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 SNRNP25Q9BV90 132 aaKnown RBP9.17□□□□□ -0.94
UBA3-208ENST00000465627 MAGEB5Q9BZ81 275 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 MTIF3Q9H2K0 278 aaKnown RBP9.17□□□□□ -0.94
UBA3-208ENST00000465627 SMOC2Q9H3U7 446 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 FBXO44Q9H4M3 255 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 ANKZF1Q9H8Y5 726 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 MRPL17Q9NRX2 175 aaKnown RBP9.17□□□□□ -0.94
UBA3-208ENST00000465627 PIGVQ9NUD9 493 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 CLIC5Q9NZA1 410 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 PRKAG3Q9UGI9 489 aa9.17□□□□□ -0.94
UBA3-208ENST00000465627 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.17□□□□□ -0.94
UBA3-208ENST00000465627 DSPP15924 2871 aaKnown RBP9.17□□□□□ -0.94
UBA3-208ENST00000465627 A0A1W2PQH9 124 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 C2orf71A6NGG8 1288 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 SLC38A8A6NNN8 435 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 CCDC188H7C350 402 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 RTN3O95197 1032 aaPredicted RBP9.16□□□□□ -0.94
UBA3-208ENST00000465627 PAPLNO95428 1278 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 RB1P06400 928 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 CD48P09326 243 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 RALAP11233 206 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 L1CAMP32004 1257 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 PAFAH1B1P43034 410 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 TUFMP49411 452 aaKnown RBP9.16□□□□□ -0.94
UBA3-208ENST00000465627 ERVK-21P61565 698 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 RPL10AP62906 217 aaKnown RBP9.16□□□□□ -0.94
UBA3-208ENST00000465627 TUBB4BP68371 445 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 ZXDAP98168 799 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 CREMQ03060 361 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 KRT17Q04695 432 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 C2orf54Q08AI8 447 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 DPYSL3Q14195 570 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 CLUL1Q15846 466 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 HADHQ16836 314 aaKnown RBP9.16□□□□□ -0.94
UBA3-208ENST00000465627 CDO1Q16878 200 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 RSPO4Q2I0M5 234 aaPredicted RBP9.16□□□□□ -0.94
UBA3-208ENST00000465627 MGAT5BQ3V5L5 792 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 BOLA3Q53S33 107 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 KCNT1Q5JUK3 1230 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 TAC4Q86UU9 113 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 CCDC185Q8N715 623 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 MRPL43Q8N983 215 aaKnown RBP9.16□□□□□ -0.94
UBA3-208ENST00000465627 GPR152Q8TDT2 470 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 DQX1Q8TE96 717 aaKnown RBP9.16□□□□□ -0.94
UBA3-208ENST00000465627 TRMT2BQ96GJ1 504 aaKnown RBP9.16□□□□□ -0.94
UBA3-208ENST00000465627 SLC39A13Q96H72 371 aa9.16□□□□□ -0.94
UBA3-208ENST00000465627 RBM41Q96IZ5 413 aaKnown RBP9.16□□□□□ -0.94
UBA3-208ENST00000465627 KLHL5Q96PQ7 755 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms