RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CTIFO43310 598 aaKnown RBP4.82□□□□□ -1.64
ITGB1-208ENST00000464001 TLX3O43711 291 aaPredicted RBP4.82□□□□□ -1.64
ITGB1-208ENST00000464001 ZC3H11AO75152 810 aaKnown RBP eCLIP4.82□□□□□ -1.64
ITGB1-208ENST00000464001 IL18RAPO95256 599 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 ST6GAL1P15907 406 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 TNFRSF1BP20333 461 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 MMP8P22894 467 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 CDC25AP30304 524 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 HOXD12P35452 270 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 IDUAP35475 653 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 GPS1Q13098 491 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 DAG1Q14118 895 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 PRTGQ2VWP7 1150 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 C11orf96Q7Z7L8 435 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 ADGRF4Q8IZF3 695 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 AKAP1Q92667 903 aaKnown RBP eCLIP4.82□□□□□ -1.64
ITGB1-208ENST00000464001 KAT2BQ92831 832 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 CELF1Q92879 486 aaKnown RBP4.82□□□□□ -1.64
ITGB1-208ENST00000464001 C8orf48Q96LL4 319 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 MAF1Q9H063 256 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 ASNSD1Q9NWL6 643 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 GEMIN8Q9NWZ8 242 aaKnown RBP4.82□□□□□ -1.64
ITGB1-208ENST00000464001 PCDHGB6Q9Y5F9 930 aa4.82□□□□□ -1.64
ITGB1-208ENST00000464001 SPATA31A5Q5VU36 1347 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 SPATA31A7Q8IWB4 1347 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 ZNF814B7Z6K7 855 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 PRR23D1E9PI22 279 aaPredicted RBP4.81□□□□□ -1.64
ITGB1-208ENST00000464001 NDUFB8O95169 186 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 FGF2P09038 288 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 PRR23D2P0DMB1 279 aaPredicted RBP4.81□□□□□ -1.64
ITGB1-208ENST00000464001 DRD1P21728 446 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 IGHMBP2P38935 993 aaKnown RBP4.81□□□□□ -1.64
ITGB1-208ENST00000464001 BFSP2Q13515 415 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 FAXCQ5TGI0 409 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 RRAGBQ5VZM2 374 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 ABLIM2Q6H8Q1 611 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 B4GALNT4Q76KP1 1039 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 KRT78Q8N1N4 520 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 PELI3Q8N2H9 469 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 OVCA2Q8WZ82 227 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 CCDC136Q96JN2 1154 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 WDR24Q96S15 920 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 TTLL2Q9BWV7 592 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 MOV10Q9HCE1 1003 aaKnown RBP4.81□□□□□ -1.64
ITGB1-208ENST00000464001 RXFP3Q9NSD7 469 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 OBP2AQ9NY56 170 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 IPO11Q9UI26 975 aaKnown RBP4.81□□□□□ -1.64
ITGB1-208ENST00000464001 COG5Q9UP83 839 aa4.81□□□□□ -1.64
ITGB1-208ENST00000464001 ZNF335Q9H4Z2 1342 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-208ENST00000464001 TRBV5-3A0A0A0MS03 114 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 RHPN2P1A8MT19 583 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 PRYO14603 147 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 UGDHO60701 494 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 CBFA2T3O75081 653 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 EPN2O95208 641 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 ENO1P06733 434 aaKnown RBP4.8□□□□□ -1.64
ITGB1-208ENST00000464001 TBXAS1P24557 533 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-208ENST00000464001 FOXD4Q12950 439 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-208ENST00000464001 UBE4AQ14139 1066 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 GLE1Q53GS7 698 aaKnown RBP4.8□□□□□ -1.64
ITGB1-208ENST00000464001 FAM90A2PQ658T7 463 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 TLDC1Q6P9B6 456 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 USP17L6PQ6QN14 398 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 CRTC1Q6UUV9 634 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 RFX8Q6ZV50 586 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 WDR75Q8IWA0 830 aaKnown RBP4.8□□□□□ -1.64
ITGB1-208ENST00000464001 ATP11CQ8NB49 1132 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 SMRP1Q8NCR6 262 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 CCDC150Q8NCX0 1101 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 GJA10Q969M2 543 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 CAMK1GQ96NX5 476 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 GATA5Q9BWX5 397 aaPredicted RBP4.8□□□□□ -1.64
ITGB1-208ENST00000464001 AS3MTQ9HBK9 375 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 MSRB1Q9NZV6 116 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 PCDHA12Q9UN75 941 aa4.8□□□□□ -1.64
ITGB1-208ENST00000464001 CLCA1A8K7I4 914 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 WDHD1O75717 1129 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-208ENST00000464001 ARP10275 920 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 NDUFS1P28331 727 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 SLC5A2P31639 672 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 SEMA3BQ13214 749 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 GAB1Q13480 694 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 INPP5JQ15735 1006 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-208ENST00000464001 TMEM196Q5HYL7 178 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 UBAP2Q5T6F2 1119 aaKnown RBP4.79□□□□□ -1.64
ITGB1-208ENST00000464001 MRNIPQ6NTE8 343 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 RFX6Q8HWS3 928 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 TMTC2Q8N394 836 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 OR52L2PQ8NGH6 319 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 LRRC46Q96FV0 321 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 SLC39A13Q96H72 371 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 ZNF845Q96IR2 970 aaPredicted RBP4.79□□□□□ -1.64
ITGB1-208ENST00000464001 APOL5Q9BWW9 433 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 MAGEB5Q9BZ81 275 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 TRIM2Q9C040 744 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 MRPL44Q9H9J2 332 aaKnown RBP4.79□□□□□ -1.64
ITGB1-208ENST00000464001 AGO2Q9UKV8 859 aaKnown RBP4.79□□□□□ -1.64
ITGB1-208ENST00000464001 CORO2BQ9UQ03 480 aa4.79□□□□□ -1.64
ITGB1-208ENST00000464001 EMSYQ7Z589 1322 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms