RNA–Protein interactions for RNA: ENST00000463837.5

CCDC88B-204, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 5,235 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-204ENST00000463837 ZRANB3Q5FWF4 1079 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 TXNRD3Q86VQ6 643 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 ACER1Q8TDN7 264 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 SLC25A23Q9BV35 468 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 BARX2Q9UMQ3 279 aaPredicted RBP19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 ROBO3Q96MS0 1386 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 DYTNA2CJ06 578 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 TBC1D12O60347 775 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 NCKAP1LP55160 1127 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 BMT2Q1RMZ1 405 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 MARK2Q7KZI7 788 aaKnown RBP19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 PIWIL2Q8TC59 973 aaKnown RBP19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 RSPH1Q8WYR4 309 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 ASB2Q96Q27 587 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 FBXO28Q9NVF7 368 aa19.48■□□□□ 0.71
CCDC88B-204ENST00000463837 ZMYM2Q9UBW7 1377 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 CTSHP09668 335 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 ETFBP38117 255 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 CD151P48509 253 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 TMEM62Q0P6H9 643 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 FAM98BQ52LJ0 330 aaKnown RBP19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 MFSD5Q6N075 450 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 ZPBP2Q6X784 338 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 PLEKHA8Q96JA3 519 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 SLITRK1Q96PX8 696 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 APOL5Q9BWW9 433 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 RRN3Q9NYV6 651 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 WWOXQ9NZC7 414 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 CLOCKO15516 846 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 C16orf72Q14CZ0 275 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 SVOPQ8N4V2 548 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 FAM163AQ96GL9 167 aaPredicted RBP19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 GPRC5DQ9NZD1 345 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 COPG1Q9Y678 874 aaKnown RBP19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 ASTN1O14525 1302 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 A0A096LPK6 155 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 STX7O15400 261 aaKnown RBP19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 PROCP04070 461 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 ITGAVP06756 1048 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 AKT1P31749 480 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 CPT1AP50416 773 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 MSLNQ13421 630 aaPredicted RBP19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 IRF2BP2Q7Z5L9 587 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 PDCD2LQ9BRP1 358 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 MRPS26Q9BYN8 205 aaKnown RBP19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 POLG2Q9UHN1 485 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 WDR27A2RRH5 827 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 ATP1A4Q13733 1029 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 FASTKQ14296 549 aaKnown RBP19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 SNX32Q86XE0 403 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 SYTL5Q8TDW5 730 aaPredicted RBP19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 PURBQ96QR8 312 aaKnown RBP19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 DCUN1D5Q9BTE7 237 aa19.47■□□□□ 0.71
CCDC88B-204ENST00000463837 RGS5O15539 181 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 CCDC142Q17RM4 750 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 CDRT15Q96T59 188 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 APOL2Q9BQE5 337 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 TMEM245Q9H330 911 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 DMAP1Q9NPF5 467 aaPredicted RBP19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 C15orf38-AP3S2A0A0A6YYH1 394 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 LDLRP01130 860 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 HK2P52789 917 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 ARPINQ7Z6K5 226 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 DHDDSQ86SQ9 333 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 KCNMB4Q86W47 210 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 ACMSDQ8TDX5 336 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 GLT1D1Q96MS3 346 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 GPR63Q9BZJ6 419 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 TMEM39BQ9GZU3 492 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 TAS2R14Q9NYV8 317 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 RNF103O00237 685 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 MRASO14807 208 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 MAP3K13O43283 966 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 CSHL1Q14406 222 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 CLVS1Q8IUQ0 354 aaPredicted RBP19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 BRSK2Q8IWQ3 736 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 PAIP1Q9H074 479 aaKnown RBP19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 H2AFY2Q9P0M6 372 aaPredicted RBP19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 LINC00854A0A1B0GVQ3 168 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 SNTNA6NMZ2 147 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 PRR23D1E9PI22 279 aaPredicted RBP19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 BIRC5O15392 142 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 PRR23D2P0DMB1 279 aaPredicted RBP19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 RAP1GAPP47736 663 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 C21orf59P57076 290 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 NFIAQ12857 509 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 GLRA4Q5JXX5 417 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 LUZP2Q86TE4 346 aa19.46■□□□□ 0.71
CCDC88B-204ENST00000463837 LZTS3O60299 673 aaPredicted RBP19.45■□□□□ 0.7
CCDC88B-204ENST00000463837 CELF2O95319 508 aaKnown RBP19.45■□□□□ 0.7
CCDC88B-204ENST00000463837 ODC1P11926 461 aa19.45■□□□□ 0.7
CCDC88B-204ENST00000463837 KDELR1P24390 212 aa19.45■□□□□ 0.7
CCDC88B-204ENST00000463837 ALDH1A3P47895 512 aa19.45■□□□□ 0.7
CCDC88B-204ENST00000463837 RNF180Q86T96 592 aa19.45■□□□□ 0.7
CCDC88B-204ENST00000463837 HEATR4Q86WZ0 1026 aa19.45■□□□□ 0.7
CCDC88B-204ENST00000463837 RNF148Q8N7C7 305 aa19.45■□□□□ 0.7
CCDC88B-204ENST00000463837 CINPQ9BW66 212 aaPredicted RBP19.45■□□□□ 0.7
CCDC88B-204ENST00000463837 ADAM28Q9UKQ2 775 aa19.45■□□□□ 0.7
CCDC88B-204ENST00000463837 AP1G2O75843 785 aa19.45■□□□□ 0.7
CCDC88B-204ENST00000463837 ANPEPP15144 967 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms