RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MYH2Q9UKX2 1941 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CENPBD1B2RD01 187 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TSPAN4O14817 238 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 NKRFO15226 690 aaKnown RBP eCLIP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 HNRNPCL1O60812 293 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 GAS7O60861 476 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 NOL3O60936 208 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 FKBP6O75344 327 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 RNASEH2AO75792 299 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 DDNO94850 711 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ALX3O95076 343 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 KRT6AP02538 564 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 KRT6BP04259 564 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 GSTM1P09488 218 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 POLR2MP0CAP2 368 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 RARBP10826 455 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 RAG1P15918 1043 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CD247P20963 164 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 BMPR1AP36894 532 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 BMXP51813 675 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ARHGDIAP52565 204 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CDH15P55291 814 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 RHAGQ02094 409 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 KLRC3Q07444 240 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 HSPA14Q0VDF9 509 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TRAF2Q12933 501 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 RLFQ13129 1914 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CALCOCO2Q13137 446 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF211Q13398 564 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TRIP13Q15645 432 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TRMT5Q32P41 509 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 PLA2G4EQ3MJ16 856 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MCMDC2Q4G0Z9 681 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 EPHA10Q5JZY3 1008 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 GALNT18Q6P9A2 607 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CROCCP2Q86T23 111 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SETD3Q86TU7 594 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 AKAP14Q86UN6 197 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 C4orf33Q8N1A6 199 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TCAIMQ8N3R3 496 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ALLCQ8N6M5 410 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 GRIN3AQ8TCU5 1115 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 C12orf43Q96C57 262 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ISOC1Q96CN7 298 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 PTCD3Q96EY7 689 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 DCUN1D1Q96GG9 259 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 OLFM1Q99784 485 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZKSCAN3Q9BRR0 538 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 KATNAL1Q9BW62 490 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 TARS2Q9BW92 718 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SLC26A6Q9BXS9 759 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 IMPG2Q9BZV3 1241 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 INO80BQ9C086 356 aaPredicted RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 NARFLQ9H6Q4 476 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZC4H2Q9NQZ6 224 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 POLE4Q9NR33 117 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 DDX28Q9NUL7 540 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 KCTD5Q9NXV2 234 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 MRPL39Q9NYK5 338 aaKnown RBP3.72□□□□□ -1.81
COL8A1-205ENST00000463753 SLC7A8Q9UHI5 535 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ATP6V1HQ9UI12 483 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 GNPTGQ9UJJ9 305 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF229Q9UJW7 825 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 PCDHA4Q9UN74 947 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 CDC14AQ9UNH5 594 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ERGIC3Q9Y282 383 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 ZNF652Q9Y2D9 606 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 UGT2A1Q9Y4X1 527 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 AP4B1Q9Y6B7 739 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 USP3Q9Y6I4 520 aa3.72□□□□□ -1.81
COL8A1-205ENST00000463753 A0A1W2PQ72 361 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 FAM47DPA6NHR8 397 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 CCDC188H7C350 402 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 CHL1O00533 1208 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 ALOX15BO15296 676 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 EDF1O60869 148 aaKnown RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 SORBS2O94875 1100 aaKnown RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 CRTAMO95727 393 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 STAU1O95793 577 aaKnown RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 TP53P04637 393 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 ASNSP08243 561 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 FAM228BP0C875 321 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 IFI30P13284 250 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 TATP17735 454 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 EEF1GP26641 437 aaKnown RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 LONP1P36776 959 aaKnown RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 NBL1P41271 181 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 METAP2P50579 478 aaKnown RBP eCLIP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 TOB1P50616 345 aaPredicted RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 PSMA6P60900 246 aaKnown RBP3.71□□□□□ -1.82
COL8A1-205ENST00000463753 ACTR3P61158 418 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 LMNB2Q03252 620 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 PTSQ03393 145 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 CHRNEQ04844 493 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 NME3Q13232 169 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 SNTA1Q13424 505 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 NAB2Q15742 525 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 MOGQ16653 247 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 PPP1R3AQ16821 1122 aa3.71□□□□□ -1.82
COL8A1-205ENST00000463753 CRY2Q49AN0 593 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms