RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 HCRTO43612 131 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 HUS1O60921 280 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 MOSPD3O75425 235 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 AFPP02771 609 aaKnown RBP6.1□□□□□ -1.43
VPS36-202ENST00000462289 CCDC192P0DO97 292 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 HAPLN1P10915 354 aaPredicted RBP6.1□□□□□ -1.43
VPS36-202ENST00000462289 HMGA1P17096 107 aaKnown RBP6.1□□□□□ -1.43
VPS36-202ENST00000462289 ATF6P18850 670 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 KLRC2P26717 231 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 PON1P27169 355 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 RPL34P49207 117 aaKnown RBP6.1□□□□□ -1.43
VPS36-202ENST00000462289 TFF2Q03403 129 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 CUL2Q13617 745 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 KRT31Q15323 416 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 NFE2Q16621 373 aaPredicted RBP6.1□□□□□ -1.43
VPS36-202ENST00000462289 CCDC142Q17RM4 750 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 SPOPLQ6IQ16 392 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 TRIM65Q6PJ69 517 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 VSTM1Q6UX27 236 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 DSTYKQ6XUX3 929 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 CCDC149Q6ZUS6 474 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 TMEM150AQ86TG1 271 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 RBM23Q86U06 439 aaKnown RBP6.1□□□□□ -1.43
VPS36-202ENST00000462289 CEP57Q86XR8 500 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 TMC8Q8IU68 726 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 FAM114A1Q8IWE2 563 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 FUKQ8N0W3 1084 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 PHC3Q8NDX5 983 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 ABHD4Q8TB40 342 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 MYCBPAPQ8TBZ2 947 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 SPPL2BQ8TCT7 592 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 CYB5D2Q8WUJ1 264 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 SHC3Q92529 594 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 TRMT2BQ96GJ1 504 aaKnown RBP6.1□□□□□ -1.43
VPS36-202ENST00000462289 SPATA17Q96L03 361 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 KREMEN1Q96MU8 473 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 NECTIN4Q96NY8 510 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 ERGIC2Q96RQ1 377 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 TWNKQ96RR1 684 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 TUBGCP2Q9BSJ2 902 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 TTLL2Q9BWV7 592 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 GPR88Q9GZN0 384 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 TRIT1Q9H3H1 467 aaKnown RBP6.1□□□□□ -1.43
VPS36-202ENST00000462289 NDST4Q9H3R1 872 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 SP110Q9HB58 689 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 PNPLA8Q9NP80 782 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 PLCB1Q9NQ66 1216 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 FANCLQ9NW38 375 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 DDX43Q9NXZ2 648 aaKnown RBP6.1□□□□□ -1.43
VPS36-202ENST00000462289 CLDND1Q9NY35 253 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 HMGXB4Q9UGU5 601 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 SIK3Q9Y2K2 1263 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 DAAM1Q9Y4D1 1078 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 USP15Q9Y4E8 981 aaPredicted RBP6.1□□□□□ -1.43
VPS36-202ENST00000462289 ASB3Q9Y575 518 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.1□□□□□ -1.43
VPS36-202ENST00000462289 INSL5Q9Y5Q6 135 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 COL4A3Q01955 1670 aa6.1□□□□□ -1.43
VPS36-202ENST00000462289 CACNA1HO95180 2353 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 SYCE3A1L190 88 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 FAM221AA4D161 298 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 LGALS16A8MUM7 142 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 BECN2A8MW95 431 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 WASH4PA8MWX3 477 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 KCNJ18B7U540 433 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 HHLA1C9JL84 531 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 ATP2C2O75185 946 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 RFPL2O75678 378 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 NOL4O94818 638 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 KRT19P08727 400 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 C1QTNF9P0C862 333 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 SRGAP2BP0DMP2 458 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 MED14OSP0DP75 135 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 P4HA1P13674 534 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 RAC2P15153 192 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 KCNA5P22460 613 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 TBXAS1P24557 533 aaPredicted RBP6.09□□□□□ -1.43
VPS36-202ENST00000462289 TPP2P29144 1249 aaPredicted RBP6.09□□□□□ -1.43
VPS36-202ENST00000462289 GNL1P36915 607 aaPredicted RBP6.09□□□□□ -1.43
VPS36-202ENST00000462289 PBX1P40424 430 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 PIK3CAP42336 1068 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 RAD23BP54727 409 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 CDH8P55286 799 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 MRPS5P82675 430 aaKnown RBP6.09□□□□□ -1.43
VPS36-202ENST00000462289 MYL7Q01449 175 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 ADCY1Q08828 1119 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 BIRC3Q13489 604 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 TRPC3Q13507 836 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 KCNJ12Q14500 433 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 MAPRE1Q15691 268 aaKnown RBP6.09□□□□□ -1.43
VPS36-202ENST00000462289 AAK1Q2M2I8 961 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 ANO6Q4KMQ2 910 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 VWA3BQ502W6 1294 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 ARHGAP17Q68EM7 881 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 SASS6Q6UVJ0 657 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 SND1Q7KZF4 910 aaKnown RBP eCLIP6.09□□□□□ -1.43
VPS36-202ENST00000462289 ENOSF1Q7L5Y1 443 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 DCP1BQ8IZD4 617 aaKnown RBP6.09□□□□□ -1.43
VPS36-202ENST00000462289 TTC9BQ8N6N2 239 aa6.09□□□□□ -1.43
VPS36-202ENST00000462289 SLC4A11Q8NBS3 891 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms