RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 AFG1LQ8WV93 481 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 HMGB4Q8WW32 186 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 GOLGA1Q92805 767 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 RFKQ969G6 155 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 WDYHV1Q96HA8 205 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 Q96MF0 132 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 CINPQ9BW66 212 aaPredicted RBP4.31□□□□□ -1.72
CLK1-206ENST00000461326 VPS16Q9H269 839 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 ZHX3Q9H4I2 956 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 RIC8AQ9NPQ8 531 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 BAG5Q9UL15 447 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 ZBTB1Q9Y2K1 713 aa4.31□□□□□ -1.72
CLK1-206ENST00000461326 COL3A1P02461 1466 aaPredicted RBP4.3□□□□□ -1.72
CLK1-206ENST00000461326 SAC3D1A6NKF1 404 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 HOXC11O43248 304 aaPredicted RBP4.3□□□□□ -1.72
CLK1-206ENST00000461326 TSPAN3O60637 253 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 CER1O95813 267 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 AGR2O95994 175 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 NPSP0C0P6 89 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 MYCLP12524 364 aaPredicted RBP4.3□□□□□ -1.72
CLK1-206ENST00000461326 CREB1P16220 341 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 HOXB6P17509 224 aaKnown RBP4.3□□□□□ -1.72
CLK1-206ENST00000461326 PBX1P40424 430 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 ZNF81P51508 661 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 SP2Q02086 613 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 TRPC3Q13507 836 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 CUL4BQ13620 913 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 ANKRD1Q15327 319 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 CYP1B1Q16678 543 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 CTXN3Q4LDR2 81 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 NAA35Q5VZE5 725 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 KAZNQ674X7 775 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 Q6ZNX1 250 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 PARS2Q7L3T8 475 aaKnown RBP4.3□□□□□ -1.72
CLK1-206ENST00000461326 P3H2Q8IVL5 708 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 SFTPA1Q8IWL2 248 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 SUGP1Q8IWZ8 645 aaKnown RBP4.3□□□□□ -1.72
CLK1-206ENST00000461326 SLC44A3Q8N4M1 653 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 SLC2A12Q8TD20 617 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 GLMPQ8WWB7 406 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 REXO5Q96IC2 774 aaKnown RBP4.3□□□□□ -1.72
CLK1-206ENST00000461326 MPP4Q96JB8 637 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 PRR25Q96S07 402 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 C1QTNF7Q9BXJ2 289 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 RNF26Q9BY78 433 aaPredicted RBP4.3□□□□□ -1.72
CLK1-206ENST00000461326 ARHGEF3Q9NR81 526 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 AMFRQ9UKV5 643 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 DERAQ9Y315 318 aa4.3□□□□□ -1.72
CLK1-206ENST00000461326 LOC105369274A0A096LPK9 316 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 LOC102723532A0A0G2JNH3 316 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 C3orf70A6NLC5 250 aaPredicted RBP4.29□□□□□ -1.72
CLK1-206ENST00000461326 SLC38A8A6NNN8 435 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 B9A039 149 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 PRRT4C9JH25 899 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 E7EVH7 732 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 HNRNPRO43390 633 aaKnown RBP4.29□□□□□ -1.72
CLK1-206ENST00000461326 EPB41L2O43491 1005 aaKnown RBP4.29□□□□□ -1.72
CLK1-206ENST00000461326 SPRY2O43597 315 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 VNN1O95497 513 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 TTLL1O95922 423 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 CHRM2P08172 466 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 CNPP09543 421 aaKnown RBP4.29□□□□□ -1.72
CLK1-206ENST00000461326 CKMT1AP12532 417 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 NDUFB7P17568 137 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 MPLP40238 635 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 PDE1AP54750 535 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 RBM6P78332 1123 aaKnown RBP4.29□□□□□ -1.72
CLK1-206ENST00000461326 E2F1Q01094 437 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 TLE3Q04726 772 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 DDX10Q13206 875 aaKnown RBP4.29□□□□□ -1.72
CLK1-206ENST00000461326 BFSP2Q13515 415 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 DNASE1L3Q13609 305 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 GALNTL6Q49A17 601 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 BBS12Q6ZW61 710 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 Q6ZWC4 215 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 ARHGEF25Q86VW2 580 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 OR4N4Q8N0Y3 316 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
CLK1-206ENST00000461326 ABHD11Q8NFV4 315 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 SLC22A17Q8WUG5 538 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 TBC1D5Q92609 795 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 CTHRC1Q96CG8 243 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 TWNKQ96RR1 684 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 SEC62Q99442 399 aaKnown RBP4.29□□□□□ -1.72
CLK1-206ENST00000461326 FSD1LQ9BXM9 530 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 CCDC134Q9H6E4 229 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 SEMA4GQ9NTN9 838 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 SERTAD4Q9NUC0 356 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 LRIT1Q9P2V4 623 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 CCNL1Q9UK58 526 aaPredicted RBP4.29□□□□□ -1.72
CLK1-206ENST00000461326 CRYL1Q9Y2S2 319 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 RRP7AQ9Y3A4 280 aaKnown RBP4.29□□□□□ -1.72
CLK1-206ENST00000461326 PCDHB7Q9Y5E2 793 aa4.29□□□□□ -1.72
CLK1-206ENST00000461326 VWC2LB2RUY7 222 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 KIF28PB7ZC32 967 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 J3KRW8 73 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 NKX2-8O15522 239 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 NR2F6P10588 404 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 TNNT1P13805 278 aa4.28□□□□□ -1.72
CLK1-206ENST00000461326 PCSK6P29122 969 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms