RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 RABGGTAQ92696 567 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 ZNF512Q96ME7 567 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 PTCHD1Q96NR3 888 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 P2RY13Q9BPV8 354 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 FDXACB1Q9BRP7 624 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 TRIM8Q9BZR9 551 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 CSRNP2Q9H175 543 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 FZD8Q9H461 694 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 FAM124BQ9H5Z6 455 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 RIOX1Q9H6W3 641 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 CELSR2Q9HCU4 2923 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 ECHDC1Q9NTX5 307 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 BCCIPQ9P287 314 aaKnown RBP eCLIP4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 MTRRQ9UBK8 725 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 B4GALT6Q9UBX8 382 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 PLEKHB1Q9UF11 243 aaPredicted RBP4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 TCEAL9Q9UHQ7 104 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 TNNQ9UQP3 1299 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 INSL5Q9Y5Q6 135 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 SNX11Q9Y5W9 270 aa4.42□□□□□ -1.7
ECHDC1-211ENST00000460558 WASH4PA8MWX3 477 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 RNF225M0QZC1 329 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 IPO5O00410 1097 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 MOSPD3O75425 235 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 KATNA1O75449 491 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 CER1O95813 267 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 ESR1P03372 595 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 ITGB2P05107 769 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 GSTM1P09488 218 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 CDK4P11802 303 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 ATF2P15336 505 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 GNSP15586 552 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 TNFRSF8P28908 595 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 TPP2P29144 1249 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 AFMP43652 599 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 GALK1P51570 392 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 HAND2P61296 217 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 TEKQ02763 1124 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 PTH1RQ03431 593 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 GRIK2Q13002 908 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 ITGB3BPQ13352 177 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 RUNX3Q13761 415 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 SART3Q15020 963 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 CRY1Q16526 586 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 KIF26BQ2KJY2 2108 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 SKOR2Q2VWA4 1001 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 TMEM177Q53S58 311 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 SLC36A4Q6YBV0 504 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 ERICH1Q86X53 443 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 ITPRIPQ8IWB1 547 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 TCEAL8Q8IYN2 117 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 ENAHQ8N8S7 591 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 IGSF22Q8N9C0 903 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 CHST14Q8NCH0 376 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 SHKBP1Q8TBC3 707 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 USP7Q93009 1102 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 TP53INP1Q96A56 240 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 NAF1Q96HR8 494 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 C8orf48Q96LL4 319 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 HSPA12BQ96MM6 686 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 MXRA8Q9BRK3 442 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 MENTQ9BUN1 341 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 FOXP3Q9BZS1 431 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 ZNF768Q9H5H4 540 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 CYP4F11Q9HBI6 524 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 TM7SF3Q9NS93 570 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 NRBP2Q9NSY0 501 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 STARD5Q9NSY2 213 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 AP5S1Q9NUS5 200 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 ERVK13-1Q9NX77 482 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 ADGRE2Q9UHX3 823 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 MAD2L2Q9UI95 211 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 MMP17Q9ULZ9 603 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 IPPQ9Y573 584 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 OTOGQ6ZRI0 2925 aa4.41□□□□□ -1.7
ECHDC1-211ENST00000460558 ANAPC1Q9H1A4 1944 aa4.4□□□□□ -1.7
ECHDC1-211ENST00000460558 CELSR1Q9NYQ6 3014 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 NPHP3-ACAD11A0A0J9YXS1 232 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 ZNF891A8MT65 544 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 GSC2O15499 205 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 ABLIM3O94929 683 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 FGAP02671 866 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 H2AFB1P0C5Y9 115 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 H2AFB2P0C5Z0 115 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 SREBF1P36956 1147 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 MATKP42679 507 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 GATA4P43694 442 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 LSSP48449 732 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 GSK3AP49840 483 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 SCNN1BP51168 640 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 NEK2P51955 445 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 ROR1Q01973 937 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 MYO1EQ12965 1108 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 TUSC3Q13454 348 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 IFI16Q16666 785 aaKnown RBP4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 INAVAQ3KP66 663 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 ARHGAP15Q53QZ3 475 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 UBXN11Q5T124 520 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 SYCP2LQ5T4T6 812 aa4.4□□□□□ -1.71
ECHDC1-211ENST00000460558 IFIT1BQ5T764 474 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms