RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 MBPP02686 304 aaPredicted RBP3.82□□□□□ -1.8
VPS8-215ENST00000460158 ITGA2BP08514 1039 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 TMIGD3P0DMS9 266 aaPredicted RBP3.82□□□□□ -1.8
VPS8-215ENST00000460158 GALNSP34059 522 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 RAE1P78406 368 aaKnown RBP3.82□□□□□ -1.8
VPS8-215ENST00000460158 CCDC15Q0P6D6 951 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 POSTNQ15063 836 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 TIGD6Q17RP2 521 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 KLHL17Q6TDP4 642 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 TRIM72Q6ZMU5 477 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 ZNF354CQ86Y25 554 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 LINC01465Q8N7H1 131 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 ANKRD42Q8N9B4 389 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 MAFAQ8NHW3 353 aaPredicted RBP3.82□□□□□ -1.8
VPS8-215ENST00000460158 SCAMP5Q8TAC9 235 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 WDR60Q8WVS4 1066 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 OVCA2Q8WZ82 227 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 DAZAP1Q96EP5 407 aaKnown RBP3.82□□□□□ -1.8
VPS8-215ENST00000460158 EDC3Q96F86 508 aaKnown RBP3.82□□□□□ -1.8
VPS8-215ENST00000460158 KAZALD1Q96I82 304 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 EIF3CQ99613 913 aaKnown RBP3.82□□□□□ -1.8
VPS8-215ENST00000460158 RTKNQ9BST9 563 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 MYLK2Q9H1R3 596 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 RIOX1Q9H6W3 641 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 PRDM8Q9NQV8 689 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 TFCP2L1Q9NZI6 479 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 FBXO2Q9UK22 296 aaPredicted RBP3.82□□□□□ -1.8
VPS8-215ENST00000460158 GTF2A1LQ9UNN4 478 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 RABGAP1Q9Y3P9 1069 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 PCDHGB3Q9Y5G1 929 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 WNT6Q9Y6F9 365 aa3.82□□□□□ -1.8
VPS8-215ENST00000460158 TCRBV5S1A1TA0A578 114 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 GXYLT2A0PJZ3 443 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 FAM90A18PA6NE21 464 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 FAM90A16PA6NEW6 464 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 FAM90A9PA6NNJ1 464 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 FAM90A5PA8MXJ8 464 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 KIF28PB7ZC32 967 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 SMIM22K7EJ46 135 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 M0QYT0 321 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 FYB1O15117 783 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 RNASEH2AO75792 299 aaKnown RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 MT-CO3P00414 261 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 HSP90AB1P08238 724 aaKnown RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 FAM90A15PP0C7V4 464 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 FAM90A14PP0C7W9 464 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 NHLRC4P0CG21 123 aaPredicted RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 ATF7P17544 494 aaPredicted RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 LMO1P25800 156 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 IGHMBP2P38935 993 aaKnown RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 AP2B1P63010 937 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 CFHR3Q02985 330 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 STRIP1Q5VSL9 837 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 TANGO2Q6ICL3 276 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 FBXO42Q6P3S6 717 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 C16orf89Q6UX73 402 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 SERPINA13PQ6UXR4 307 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 KRT27Q7Z3Y8 459 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 TRABD2AQ86V40 505 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 PRIMA1Q86XR5 153 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 SLC44A2Q8IWA5 706 aaPredicted RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 CCDC117Q8IWD4 279 aaPredicted RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 BOLLQ8N9W6 283 aaKnown RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 SPATA5Q8NB90 893 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 OTUD7AQ8TE49 926 aaPredicted RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 TRAPPC12Q8WVT3 735 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 RSC1A1Q92681 617 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 TBC1D20Q96BZ9 403 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 SCLT1Q96NL6 688 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 PAAF1Q9BRP4 392 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 MECRQ9BV79 373 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 CINPQ9BW66 212 aaPredicted RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 TMEM120AQ9BXJ8 343 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 PABPC3Q9H361 631 aaKnown RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 R3HDMLQ9H3Y0 253 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 RXFP3Q9NSD7 469 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 POLG2Q9UHN1 485 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 FZD4Q9ULV1 537 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 NAP1L2Q9ULW6 460 aaPredicted RBP3.81□□□□□ -1.8
VPS8-215ENST00000460158 DAPP1Q9UN19 280 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 CNTN6Q9UQ52 1028 aa3.81□□□□□ -1.8
VPS8-215ENST00000460158 AOX1Q06278 1338 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 LOC105369274A0A096LPK9 316 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 LOC102723532A0A0G2JNH3 316 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.8□□□□□ -1.8
VPS8-215ENST00000460158 H7C1Q1 480 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 CLIC1O00299 241 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 PPP6R2O75170 966 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 PEPDP12955 493 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 MMP8P22894 467 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 THBS4P35443 961 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 JAK3P52333 1124 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 POLE2P56282 527 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 GEMIN4P57678 1058 aaKnown RBP3.8□□□□□ -1.8
VPS8-215ENST00000460158 PRKG1Q13976 671 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 MFSD13AQ14CX5 517 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 FAM187BQ17R55 369 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 TRIM60Q495X7 471 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 TMEM119Q4V9L6 283 aa3.8□□□□□ -1.8
VPS8-215ENST00000460158 AWAT1Q58HT5 328 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms