RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 NBPF20Q3BBV1 942 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 LGSNQ5TDP6 509 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 LRRC52Q8N7C0 313 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 E2F7Q96AV8 911 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 RSRC1Q96IZ7 334 aaKnown RBP18.72■□□□□ 0.59
HPS3-202ENST00000460120 QKIQ96PU8 341 aaKnown RBP eCLIP18.72■□□□□ 0.59
HPS3-202ENST00000460120 FAM167BQ9BTA0 163 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 CADM1Q9BY67 442 aaKnown RBP18.72■□□□□ 0.59
HPS3-202ENST00000460120 PPARGC1AQ9UBK2 798 aaKnown RBP18.72■□□□□ 0.59
HPS3-202ENST00000460120 CCDC78A2IDD5 438 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 FCHO1O14526 889 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 PEX11AO75192 247 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 ENO1P06733 434 aaKnown RBP18.72■□□□□ 0.59
HPS3-202ENST00000460120 MYL3P08590 195 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 PRKCHP24723 683 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 PTPN4P29074 926 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 PTPN9P43378 593 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 RASSF2P50749 326 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 MAP3K7CLP57077 242 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 INPP5DQ92835 1189 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 EMID1Q96A84 441 aaPredicted RBP18.72■□□□□ 0.59
HPS3-202ENST00000460120 ARHGEF4Q9NR80 690 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 CNTN3Q9P232 1028 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 PSAT1Q9Y617 370 aa18.72■□□□□ 0.59
HPS3-202ENST00000460120 GYG2O15488 501 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 LYPLA1O75608 230 aaPredicted RBP18.71■□□□□ 0.59
HPS3-202ENST00000460120 SNX16P57768 344 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 ARHGAP17Q68EM7 881 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 DSTYKQ6XUX3 929 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 PGBD4Q96DM1 585 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 OXNAD1Q96HP4 312 aaPredicted RBP18.71■□□□□ 0.59
HPS3-202ENST00000460120 CPA4Q9UI42 421 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 MYO18AQ92614 2054 aaKnown RBP18.71■□□□□ 0.59
HPS3-202ENST00000460120 RBM47A0AV96 593 aaKnown RBP18.71■□□□□ 0.59
HPS3-202ENST00000460120 GCATO75600 419 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 ESRRAP11474 423 aaPredicted RBP18.71■□□□□ 0.59
HPS3-202ENST00000460120 MLH1P40692 756 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 TAF6P49848 677 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 ALDH18A1P54886 795 aaKnown RBP18.71■□□□□ 0.59
HPS3-202ENST00000460120 AQP5P55064 265 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 PARP6Q2NL67 630 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 LDLRAD1Q5T700 205 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 WSCD1Q658N2 575 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 TWF2Q6IBS0 349 aaKnown RBP18.71■□□□□ 0.59
HPS3-202ENST00000460120 TLDC1Q6P9B6 456 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 USP50Q70EL3 339 aaPredicted RBP18.71■□□□□ 0.59
HPS3-202ENST00000460120 APBB1IPQ7Z5R6 666 aaPredicted RBP18.71■□□□□ 0.59
HPS3-202ENST00000460120 UNC93AQ86WB7 457 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 CHSY1Q86X52 802 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 B3GALNT2Q8NCR0 500 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 USP6NLQ92738 828 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 P2RY11Q96G91 374 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 RILPQ96NA2 401 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 PNPLA8Q9NP80 782 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 PCDHA11Q9Y5I1 949 aa18.71■□□□□ 0.59
HPS3-202ENST00000460120 PIRO00625 290 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 ERVK-10P10266 1014 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 KCNA4P22459 653 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 AFF1P51825 1210 aaKnown RBP18.7■□□□□ 0.58
HPS3-202ENST00000460120 RPL10AP62906 217 aaKnown RBP18.7■□□□□ 0.58
HPS3-202ENST00000460120 KDSRQ06136 332 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 SNX17Q15036 470 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 MCUR1Q96AQ8 359 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 MS4A4AQ96JQ5 239 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 C11orf84Q9BUA3 381 aaPredicted RBP18.7■□□□□ 0.58
HPS3-202ENST00000460120 ABHD16BQ9H3Z7 469 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 SNX10Q9Y5X0 201 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 FAM72CH0Y354 149 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 MATKP42679 507 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 PPM1JQ5JR12 505 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 FAM72AQ5TYM5 149 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 FAM72DQ6L9T8 149 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 FAM72BQ86X60 149 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 RNF169Q8NCN4 708 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 FBXO27Q8NI29 283 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 SLC7A14Q8TBB6 771 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 RNF139Q8WU17 664 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 NSL1Q96IY1 281 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 APOL2Q9BQE5 337 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 LRRC4Q9HBW1 653 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 FZD10Q9ULW2 581 aa18.7■□□□□ 0.58
HPS3-202ENST00000460120 AMHP03971 560 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 ALKAL1Q6UXT8 129 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 ZDHHC17Q8IUH5 632 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 SIX6OS1Q8N1H7 587 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 CENPIQ92674 756 aaPredicted RBP18.69■□□□□ 0.58
HPS3-202ENST00000460120 SKA1Q96BD8 255 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 PRDM12Q9H4Q4 367 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 RNPEPL1Q9HAU8 725 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 PIGVQ9NUD9 493 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 SYBUQ9NX95 663 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 MTO1Q9Y2Z2 717 aaKnown RBP18.69■□□□□ 0.58
HPS3-202ENST00000460120 IPPQ9Y573 584 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 TRDMT1O14717 391 aaKnown RBP18.69■□□□□ 0.58
HPS3-202ENST00000460120 TPP1O14773 563 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 CAPN9O14815 690 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 ZFXP17010 805 aaPredicted RBP18.69■□□□□ 0.58
HPS3-202ENST00000460120 LILRA4P59901 499 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 MFSD10Q14728 455 aa18.69■□□□□ 0.58
HPS3-202ENST00000460120 PPP2R5DQ14738 602 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms