RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 NAT16Q8N8M0 369 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 HSFY1Q96LI6 401 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 NOX5Q96PH1 765 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 EIF3CQ99613 913 aaKnown RBP16.29■□□□□ 0.2
SDF4-204ENST00000459994 SLC4A5Q9BY07 1137 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 FBXO44Q9H4M3 255 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 TLR8Q9NR97 1041 aaKnown RBP16.29■□□□□ 0.2
SDF4-204ENST00000459994 GMEB2Q9UKD1 530 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 USP18Q9UMW8 372 aa16.29■□□□□ 0.2
SDF4-204ENST00000459994 ATG13O75143 517 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 RTN2O75298 545 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 NDUFA10O95299 355 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 GFPT1Q06210 699 aaPredicted RBP16.28■□□□□ 0.2
SDF4-204ENST00000459994 FBXO43Q4G163 708 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 C10orf76Q5T2E6 689 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 NAA35Q5VZE5 725 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 TMEM92Q6UXU6 159 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 CEP68Q76N32 757 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 SYT13Q7L8C5 426 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 DDX42Q86XP3 938 aaKnown RBP eCLIP16.28■□□□□ 0.2
SDF4-204ENST00000459994 PHF13Q86YI8 300 aaPredicted RBP16.28■□□□□ 0.2
SDF4-204ENST00000459994 C1orf131Q8NDD1 294 aaKnown RBP16.28■□□□□ 0.2
SDF4-204ENST00000459994 GAB3Q8WWW8 586 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 KCTD13Q8WZ19 329 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 NDRG1Q92597 394 aaKnown RBP16.28■□□□□ 0.2
SDF4-204ENST00000459994 ISCUQ9H1K1 167 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 KCNF1Q9H3M0 494 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 SPTLC3Q9NUV7 552 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.28■□□□□ 0.2
SDF4-204ENST00000459994 HCN2Q9UL51 889 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 RAB23Q9ULC3 237 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 INVSQ9Y283 1065 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 SH3BP1Q9Y3L3 701 aa16.28■□□□□ 0.2
SDF4-204ENST00000459994 SLC9A3R1O14745 358 aaPredicted RBP16.27■□□□□ 0.2
SDF4-204ENST00000459994 RPP40O75818 363 aaKnown RBP16.27■□□□□ 0.2
SDF4-204ENST00000459994 RARGP13631 454 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 MMP8P22894 467 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 CNR2P34972 360 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 TIE1P35590 1138 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 ACADSBP45954 432 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 NSFP46459 744 aaKnown RBP16.27■□□□□ 0.2
SDF4-204ENST00000459994 SNX16P57768 344 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 PDCLQ13371 301 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 CCDC122Q5T0U0 273 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 PMF1Q6P1K2 205 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 TMEM110Q86TL2 294 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 PIGZQ86VD9 579 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 ETFBKMTQ8IXQ9 262 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 ALLCQ8N6M5 410 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 KIAA1958Q8N8K9 716 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 MSANTD4Q8NCY6 345 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 CPA5Q8WXQ8 436 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 VCPIP1Q96JH7 1222 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 PNKPQ96T60 521 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 TPSD1Q9BZJ3 242 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 MIS12Q9H081 205 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 SMOC1Q9H4F8 434 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 DLL3Q9NYJ7 618 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 TAS2R14Q9NYV8 317 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 CYTH4Q9UIA0 394 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 USP3Q9Y6I4 520 aa16.27■□□□□ 0.2
SDF4-204ENST00000459994 ADAMTS9Q9P2N4 1935 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 MED19A0JLT2 244 aaPredicted RBP16.26■□□□□ 0.19
SDF4-204ENST00000459994 SGK1O00141 431 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 AXIN1O15169 862 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 GDF9O60383 454 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 KAT7O95251 611 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 IPO7O95373 1038 aaKnown RBP16.26■□□□□ 0.19
SDF4-204ENST00000459994 FTLP02792 175 aaPredicted RBP16.26■□□□□ 0.19
SDF4-204ENST00000459994 RETP07949 1114 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 KIR2DL1P43626 348 aaPredicted RBP16.26■□□□□ 0.19
SDF4-204ENST00000459994 GABRB2P47870 512 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 C1QBPQ07021 282 aaKnown RBP16.26■□□□□ 0.19
SDF4-204ENST00000459994 SPA17Q15506 151 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 HS1BP3Q53T59 392 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 RAB41Q5JT25 222 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 ERICH1Q86X53 443 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 IL17RCQ8NAC3 791 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 PPP1R13BQ96KQ4 1090 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 ZNF830Q96NB3 372 aaPredicted RBP16.26■□□□□ 0.19
SDF4-204ENST00000459994 NACA2Q9H009 215 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 LUC7LQ9NQ29 371 aaKnown RBP16.26■□□□□ 0.19
SDF4-204ENST00000459994 SPHK2Q9NRA0 654 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 SEMA4GQ9NTN9 838 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 TBC1D14Q9P2M4 693 aa16.26■□□□□ 0.19
SDF4-204ENST00000459994 ADAM23O75077 832 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 TULP3O75386 442 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 KLF8O95600 359 aaPredicted RBP16.25■□□□□ 0.19
SDF4-204ENST00000459994 ADH1CP00326 375 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 CALB1P05937 261 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 H2AFZP0C0S5 128 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 ATP5C1P36542 298 aaKnown RBP16.25■□□□□ 0.19
SDF4-204ENST00000459994 KRT83P78385 493 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 GAD2Q05329 585 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 PTP4A2Q12974 167 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 ANO4Q32M45 955 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 PTPN20Q4JDL3 420 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 TPGS1Q6ZTW0 290 aa16.25■□□□□ 0.19
SDF4-204ENST00000459994 HTR3DQ70Z44 454 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms