RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 HES6Q96HZ4 224 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 SLC2A13Q96QE2 648 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 CNPY3Q9BT09 278 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 DDX23Q9BUQ8 820 aaKnown RBP10.73□□□□□ -0.69
USP39-210ENST00000459775 CCSER2Q9H7U1 834 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 POPDC2Q9HBU9 364 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 PNPLA8Q9NP80 782 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 ANLNQ9NQW6 1124 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 MAN1C1Q9NR34 630 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 XPO7Q9UIA9 1087 aaKnown RBP10.73□□□□□ -0.69
USP39-210ENST00000459775 FBXW11Q9UKB1 542 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 SCML2Q9UQR0 700 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 PDE2AO00408 941 aaPredicted RBP10.73□□□□□ -0.69
USP39-210ENST00000459775 KRT38O76015 456 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 PEX5P50542 639 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 SH3BGRP55822 239 aaPredicted RBP10.73□□□□□ -0.69
USP39-210ENST00000459775 SNX16P57768 344 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 UBE3AQ05086 875 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 SMARCB1Q12824 385 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 CA9Q16790 459 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 PREPLQ4J6C6 727 aaPredicted RBP10.73□□□□□ -0.69
USP39-210ENST00000459775 ARMC3Q5W041 872 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 CYP4V2Q6ZWL3 525 aaPredicted RBP10.73□□□□□ -0.69
USP39-210ENST00000459775 ADAT2Q7Z6V5 191 aaKnown RBP10.73□□□□□ -0.69
USP39-210ENST00000459775 TAC4Q86UU9 113 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 CCDC185Q8N715 623 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 ZFPM2Q8WW38 1151 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 CASP10Q92851 521 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 SPATA17Q96L03 361 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 OSBPL9Q96SU4 736 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 HERPUD2Q9BSE4 406 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 PIGVQ9NUD9 493 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 IL37Q9NZH6 218 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 ZMAT5Q9UDW3 170 aaKnown RBP10.73□□□□□ -0.69
USP39-210ENST00000459775 SNX12Q9UMY4 172 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 HCFC2Q9Y5Z7 792 aa10.73□□□□□ -0.69
USP39-210ENST00000459775 C2orf78A6NCI8 922 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 SCAMP3O14828 347 aaKnown RBP10.72□□□□□ -0.69
USP39-210ENST00000459775 LINC01565O15544 149 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 TADA3O75528 432 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 DAB1O75553 588 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 CD48P09326 243 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 MYBL2P10244 700 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 PYGMP11217 842 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 ALADP13716 330 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 PSMA3P25788 255 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 GGCXP38435 758 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 NTHL1P78549 312 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 SLC25A11Q02978 314 aaKnown RBP10.72□□□□□ -0.69
USP39-210ENST00000459775 PIGHQ14442 188 aaPredicted RBP10.72□□□□□ -0.69
USP39-210ENST00000459775 FAM182AQ5T1J6 154 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 STXBP5Q5T5C0 1151 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 PAPD7Q5XG87 772 aaKnown RBP10.72□□□□□ -0.69
USP39-210ENST00000459775 BTBD8Q5XKL5 378 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 TMEM150AQ86TG1 271 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 SYCE1Q8N0S2 351 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 DQX1Q8TE96 717 aaKnown RBP10.72□□□□□ -0.69
USP39-210ENST00000459775 RAPGEF5Q92565 580 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 HSPH1Q92598 858 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
USP39-210ENST00000459775 ZNF512Q96ME7 567 aaPredicted RBP10.72□□□□□ -0.69
USP39-210ENST00000459775 CYP2S1Q96SQ9 504 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 NPY6RQ99463 290 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 TLE6Q9H808 572 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 SSX2IPQ9Y2D8 614 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 SNX10Q9Y5X0 201 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 PLXNA3P51805 1871 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.72□□□□□ -0.69
USP39-210ENST00000459775 A0A1W2PRQ8 180 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 TCRBV7S2A1N4TA0A589 114 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 HOXC13P31276 330 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 NOS2P35228 1153 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 TAF12Q16514 161 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 SLC25A52Q3SY17 297 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 MON1AQ86VX9 555 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 MIB1Q86YT6 1006 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 PYROXD2Q8N2H3 581 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 TTC16Q8NEE8 873 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.72□□□□□ -0.69
USP39-210ENST00000459775 SLC22A12Q96S37 553 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 CORO1BQ9BR76 489 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 DDIT4Q9NX09 232 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 SAR1BQ9Y6B6 198 aa10.72□□□□□ -0.69
USP39-210ENST00000459775 MYO9BQ13459 2157 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 FAM92AA1XBS5 289 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 TRUB2O95900 331 aaKnown RBP10.71□□□□□ -0.69
USP39-210ENST00000459775 HMBSP08397 361 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 RARAP10276 462 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 RARGP13631 454 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 CTNNA1P35221 906 aaKnown RBP10.71□□□□□ -0.69
USP39-210ENST00000459775 CCR2P41597 374 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 EPHB3P54753 998 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 CREMQ03060 361 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 EFEMP1Q12805 493 aa10.71□□□□□ -0.69
USP39-210ENST00000459775 PDCD2Q16342 344 aaPredicted RBP10.71□□□□□ -0.69
USP39-210ENST00000459775 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.71□□□□□ -0.69
USP39-210ENST00000459775 CCBE1Q6UXH8 406 aaPredicted RBP10.71□□□□□ -0.69
USP39-210ENST00000459775 RSRC2Q7L4I2 434 aaKnown RBP10.71□□□□□ -0.69
USP39-210ENST00000459775 ALYREFQ86V81 257 aaKnown RBP10.71□□□□□ -0.69
USP39-210ENST00000459775 GPR65Q8IYL9 337 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms