RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 FAM204AQ9H8W3 233 aa24.1■■□□□ 1.45
CBX3-204ENST00000456948 RTN4Q9NQC3 1192 aaKnown RBP24.1■■□□□ 1.45
CBX3-204ENST00000456948 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.1■■□□□ 1.45
CBX3-204ENST00000456948 FBXO10Q9UK96 956 aa24.1■■□□□ 1.45
CBX3-204ENST00000456948 SLC27A6Q9Y2P4 619 aa24.1■■□□□ 1.45
CBX3-204ENST00000456948 DMDP11532 3685 aa24.09■■□□□ 1.45
CBX3-204ENST00000456948 NPC1O15118 1278 aa24.09■■□□□ 1.45
CBX3-204ENST00000456948 TIMM44O43615 452 aa24.09■■□□□ 1.45
CBX3-204ENST00000456948 PTPN20Q4JDL3 420 aa24.09■■□□□ 1.45
CBX3-204ENST00000456948 SYPL2Q5VXT5 272 aa24.09■■□□□ 1.45
CBX3-204ENST00000456948 CEP68Q76N32 757 aa24.09■■□□□ 1.45
CBX3-204ENST00000456948 SLC26A9Q7LBE3 791 aa24.09■■□□□ 1.45
CBX3-204ENST00000456948 APTXQ7Z2E3 356 aaKnown RBP24.09■■□□□ 1.45
CBX3-204ENST00000456948 TXNDC5Q8NBS9 432 aaKnown RBP24.09■■□□□ 1.45
CBX3-204ENST00000456948 DDX1Q92499 740 aaKnown RBP24.09■■□□□ 1.45
CBX3-204ENST00000456948 HINFPQ9BQA5 517 aa24.09■■□□□ 1.45
CBX3-204ENST00000456948 EPC1Q9H2F5 836 aa24.09■■□□□ 1.45
CBX3-204ENST00000456948 EBF1Q9UH73 591 aa24.09■■□□□ 1.45
CBX3-204ENST00000456948 STAP1Q9ULZ2 295 aa24.09■■□□□ 1.45
CBX3-204ENST00000456948 PTPRZ1P23471 2315 aaPredicted RBP24.09■■□□□ 1.45
CBX3-204ENST00000456948 AXIN1O15169 862 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 TSPAN3O60637 253 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 ERBB2P04626 1255 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 MMEP08473 750 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 NOS2P35228 1153 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 SCNN1AP37088 669 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 KIR2DL1P43626 348 aaPredicted RBP24.08■■□□□ 1.45
CBX3-204ENST00000456948 ARID5AQ03989 594 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 SIM2Q14190 667 aaPredicted RBP24.08■■□□□ 1.45
CBX3-204ENST00000456948 CRY1Q16526 586 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 MPP7Q5T2T1 576 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 OLFML1Q6UWY5 402 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 ANKS1BQ7Z6G8 1248 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 TAC4Q86UU9 113 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 DEFB106AQ8N104 65 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 ATP6V0D2Q8N8Y2 350 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 IL17RCQ8NAC3 791 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 ZNF397Q8NF99 534 aaPredicted RBP24.08■■□□□ 1.45
CBX3-204ENST00000456948 ADAM32Q8TC27 787 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 SLC2A13Q96QE2 648 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 HHIPQ96QV1 700 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 C2orf42Q9NWW7 574 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 PAXBP1Q9Y5B6 917 aa24.08■■□□□ 1.45
CBX3-204ENST00000456948 MYO18AQ92614 2054 aaKnown RBP24.07■■□□□ 1.44
CBX3-204ENST00000456948 RIF1Q5UIP0 2472 aaKnown RBP24.07■■□□□ 1.44
CBX3-204ENST00000456948 CISD3P0C7P0 127 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 ABCB4P21439 1286 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 NTSR1P30989 418 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 CCR1P32246 355 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 GABRB2P47870 512 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 IQCB1Q15051 598 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 ZSCAN23Q3MJ62 389 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 EMC10Q5UCC4 262 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 PRR23BQ6ZRT6 265 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 SND1Q7KZF4 910 aaKnown RBP eCLIP24.07■■□□□ 1.44
CBX3-204ENST00000456948 CHPFQ8IZ52 775 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 RUBCNQ92622 972 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 SLC39A13Q96H72 371 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 BTN2A3PQ96KV6 586 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 FCRL2Q96LA5 508 aaPredicted RBP24.07■■□□□ 1.44
CBX3-204ENST00000456948 DDIT4Q9NX09 232 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 NCDNQ9UBB6 729 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 TJP2Q9UDY2 1190 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 MYO6Q9UM54 1294 aa24.07■■□□□ 1.44
CBX3-204ENST00000456948 KIAA1549LQ6ZVL6 1849 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 EPHB6O15197 1021 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 DAB1O75553 588 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 GRAP2O75791 330 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 FERP16591 822 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 MESP2Q0VG99 397 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 EIF4HQ15056 248 aaKnown RBP24.06■■□□□ 1.44
CBX3-204ENST00000456948 TAF5Q15542 800 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 NAA35Q5VZE5 725 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 C11orf74Q86VG3 221 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 HJURPQ8NCD3 748 aaPredicted RBP24.06■■□□□ 1.44
CBX3-204ENST00000456948 CPA5Q8WXQ8 436 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 CBX8Q9HC52 389 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.06■■□□□ 1.444e-9■□□□□ 8.8
CBX3-204ENST00000456948 NOCTQ9UK39 431 aaKnown RBP24.06■■□□□ 1.44
CBX3-204ENST00000456948 GMEB2Q9UKD1 530 aa24.06■■□□□ 1.44
CBX3-204ENST00000456948 SMG5Q9UPR3 1016 aaKnown RBP24.06■■□□□ 1.44
CBX3-204ENST00000456948 A0A1W2PQC6 194 aa24.05■■□□□ 1.44
CBX3-204ENST00000456948 TRIM24O15164 1050 aa24.05■■□□□ 1.44
CBX3-204ENST00000456948 RPP40O75818 363 aaKnown RBP24.05■■□□□ 1.44
CBX3-204ENST00000456948 MOCS2O96007 188 aaPredicted RBP24.05■■□□□ 1.44
CBX3-204ENST00000456948 F9P00740 461 aa24.05■■□□□ 1.44
CBX3-204ENST00000456948 MATKP42679 507 aa24.05■■□□□ 1.44
CBX3-204ENST00000456948 RNASE9P60153 205 aaKnown RBP24.05■■□□□ 1.44
CBX3-204ENST00000456948 NOMO3P69849 1222 aa24.05■■□□□ 1.44
CBX3-204ENST00000456948 DMWDQ09019 674 aa24.05■■□□□ 1.44
CBX3-204ENST00000456948 BYSLQ13895 437 aaKnown RBP24.05■■□□□ 1.44
CBX3-204ENST00000456948 USP39Q53GS9 565 aaKnown RBP24.05■■□□□ 1.44
CBX3-204ENST00000456948 ZC3H12AQ5D1E8 599 aaKnown RBP24.05■■□□□ 1.44
CBX3-204ENST00000456948 FAM102AQ5T9C2 384 aaPredicted RBP24.05■■□□□ 1.44
CBX3-204ENST00000456948 PIK3R6Q5UE93 754 aa24.05■■□□□ 1.44
CBX3-204ENST00000456948 SUMF1Q8NBK3 374 aa24.05■■□□□ 1.44
CBX3-204ENST00000456948 WFIKKN2Q8TEU8 576 aa24.05■■□□□ 1.44
CBX3-204ENST00000456948 GAB3Q8WWW8 586 aa24.05■■□□□ 1.44
CBX3-204ENST00000456948 SEPT11Q9NVA2 429 aaKnown RBP24.05■■□□□ 1.44
CBX3-204ENST00000456948 BCCIPQ9P287 314 aaKnown RBP eCLIP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms