RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 TRIM39Q9HCM9 518 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 KLHL11Q9NVR0 708 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 COX16Q9P0S2 106 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 PHF11Q9UIL8 331 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 CDH22Q9UJ99 828 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 EIF3LQ9Y262 564 aaKnown RBP5.13□□□□□ -1.59
PCDH9-203ENST00000456367 MTF2Q9Y483 593 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-203ENST00000456367 RPS6KL1Q9Y6S9 549 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 SH3PXD2BA1X283 911 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 CAPN8A6NHC0 703 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 NOTOA8MTQ0 251 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 HDAC3O15379 428 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 FARP2O94887 1054 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-203ENST00000456367 FKBP9O95302 570 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 ANXA6P08133 673 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 CYP2D6P10635 497 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 PGAM1P18669 254 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 GARTP22102 1010 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 HSD17B4P51659 736 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 CCR3P51677 355 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 RHBDL3P58872 404 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 MTMR1Q13613 665 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 NCOA4Q13772 614 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 TRIP4Q15650 581 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-203ENST00000456367 KLHDC10Q6PID8 442 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 SLFN11Q7Z7L1 901 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 C12orf56Q8IXR9 622 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 SYTL1Q8IYJ3 562 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 CNTD1Q8N815 330 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 RTL3Q8N8U3 475 aaKnown RBP5.13□□□□□ -1.59
PCDH9-203ENST00000456367 VPS37AQ8NEZ2 397 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 ACTL9Q8TC94 416 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 PHF21AQ96BD5 680 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 TADA1Q96BN2 335 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 PPP1R36Q96LQ0 422 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 NIF3L1Q9GZT8 377 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 HIPK3Q9H422 1215 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 ALKQ9UM73 1620 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 SPEF1Q9Y4P9 236 aa5.13□□□□□ -1.59
PCDH9-203ENST00000456367 TNS3Q68CZ2 1445 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 CCDC154A6NI56 674 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 CENPBD1B2RD01 187 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 USP17L10C9JJH3 530 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 KBTBD13C9JR72 458 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 TBX10O75333 385 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 ANXA9O76027 345 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 RECQL5O94762 991 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-203ENST00000456367 RARBP10826 455 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 PABPC1P11940 636 aaKnown RBP5.12□□□□□ -1.59
PCDH9-203ENST00000456367 NPR3P17342 541 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 ATP6V1B2P21281 511 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 RRM1P23921 792 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 ALDH1B1P30837 517 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 SSTR1P30872 391 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 PTGS2P35354 604 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 ATP6V1E1P36543 226 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 CCNFP41002 786 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 IST1P53990 364 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 CUL2Q13617 745 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 NRF1Q16656 503 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 DGKDQ16760 1214 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 CYP51A1Q16850 503 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 CCDC142Q17RM4 750 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 MTERF2Q49AM1 385 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 TJAP1Q5JTD0 557 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 ANGEL2Q5VTE6 544 aaKnown RBP5.12□□□□□ -1.59
PCDH9-203ENST00000456367 ATG14Q6ZNE5 492 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 IRF2BP2Q7Z5L9 587 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 METTL23Q86XA0 190 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 RAB43Q86YS6 212 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 PGAM4Q8N0Y7 254 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 ACTRT2Q8TDY3 377 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 C10orf82Q8WW14 230 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 MYDGFQ969H8 173 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 IFT43Q96FT9 208 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 PLEKHA8Q96JA3 519 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 MED15Q96RN5 788 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 PRRG3Q9BZD7 231 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 EBF3Q9H4W6 596 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 ABCB10Q9NRK6 738 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 ETNK2Q9NVF9 386 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 POLG2Q9UHN1 485 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 POLIQ9UNA4 740 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 MAPRE3Q9UPY8 281 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 EFR3BQ9Y2G0 817 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 SUGT1Q9Y2Z0 365 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 RAP2CQ9Y3L5 183 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 TRIM64CA6NLI5 447 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 LOC110117498-PIK3R3F6TDL0 507 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 PSMD12O00232 456 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-203ENST00000456367 INPP4BO15327 924 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 TNFRSF21O75509 655 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 BBOX1O75936 387 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 SNAPC5O75971 98 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 NADKO95544 446 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-203ENST00000456367 ABL1P00519 1130 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 SNRPB2P08579 225 aaKnown RBP5.12□□□□□ -1.59
PCDH9-203ENST00000456367 C6orf222P0C671 652 aaPredicted RBP5.12□□□□□ -1.59
PCDH9-203ENST00000456367 UMPSP11172 480 aa5.12□□□□□ -1.59
PCDH9-203ENST00000456367 PCNAP12004 261 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms