RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 PRKCIP41743 596 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 MATKP42679 507 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 GABRB2P47870 512 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 SGSHP51688 502 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 GSCP56915 257 aaPredicted RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 RNASE9P60153 205 aaKnown RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 ZBED6P86452 979 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 C1QBPQ07021 282 aaKnown RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 TCF15Q12870 199 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 PPP2R5DQ14738 602 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 FBXO43Q4G163 708 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 PREPLQ4J6C6 727 aaPredicted RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 FAM133BQ5BKY9 247 aaKnown RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 ZC3H12AQ5D1E8 599 aaKnown RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 C10orf76Q5T2E6 689 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 FYB2Q5VWT5 728 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 NADSYN1Q6IA69 706 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 PPP1R2P3Q6NXS1 205 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 SARM1Q6SZW1 724 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 ANKS1BQ7Z6G8 1248 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 VPS36Q86VN1 386 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 PHF13Q86YI8 300 aaPredicted RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 C1orf210Q8IVY1 113 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 VSTM4Q8IW00 320 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 SFTPA1Q8IWL2 248 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 ADGRG2Q8IZP9 1017 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 PHTF2Q8N3S3 785 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 EMC1Q8N766 993 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 NAT16Q8N8M0 369 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 HJURPQ8NCD3 748 aaPredicted RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 C3orf20Q8ND61 904 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 RPLP0P6Q8NHW5 317 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 OLIG1Q8TAK6 271 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 DDI1Q8WTU0 396 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 CPLX3Q8WVH0 158 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 RNF34Q969K3 372 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 SLC39A13Q96H72 371 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 PNKPQ96T60 521 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 DDX50Q9BQ39 737 aaKnown RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 SYT11Q9BT88 431 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 SELENOOQ9BVL4 669 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 NUCKS1Q9H1E3 243 aaKnown RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 HAUS4Q9H6D7 363 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 LMAN1LQ9HAT1 526 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 RRN3Q9NYV6 651 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 TAS2R14Q9NYV8 317 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 PLK2Q9NYY3 685 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 ADAM22Q9P0K1 906 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 WDR35Q9P2L0 1181 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 DEC1Q9P2X7 70 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 EP300Q09472 2414 aaPredicted RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 PLXND1Q9Y4D7 1925 aa7.34□□□□□ -1.23
COMMD1-205ENST00000455659 ZFHX2Q9C0A1 2572 aaPredicted RBP7.34□□□□□ -1.23
COMMD1-205ENST00000455659 LAMA1P25391 3075 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 DMXL1Q9Y485 3027 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 TMCO5BA8MYB1 307 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 F5H5T6 163 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 H0Y858 1186 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 ACSL4O60488 711 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 TSPAN3O60637 253 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 MFAP3LO75121 409 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 GJB6O95452 261 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 SERPING1P05155 500 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 SLC2A3P11169 496 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 SKILP12757 684 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 TFE3P19532 575 aaPredicted RBP7.33□□□□□ -1.24
COMMD1-205ENST00000455659 ABCB4P21439 1286 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 TNFAIP3P21580 790 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 SDC4P31431 198 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 SLC6A4P31645 630 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 CASP14P31944 242 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 GBP1P32455 592 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 RDXP35241 583 aaKnown RBP7.33□□□□□ -1.24
COMMD1-205ENST00000455659 GGCXP38435 758 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 GRIA2P42262 883 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 SLC6A11P48066 632 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 DGKGP49619 791 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 GALK1P51570 392 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 SATB1Q01826 763 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 DEUP1Q05D60 604 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 MESP2Q0VG99 397 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 PTP4A2Q12974 167 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 FZD5Q13467 585 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 CDH18Q13634 790 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 GAS6Q14393 721 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 CDO1Q16878 200 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 MPPE1Q53F39 396 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 ADGRF1Q5T601 910 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 RAP1GAP2Q684P5 730 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 TRNP1Q6NT89 227 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 PKN3Q6P5Z2 889 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 RFWD3Q6PCD5 774 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 SND1Q7KZF4 910 aaKnown RBP eCLIP7.33□□□□□ -1.24
COMMD1-205ENST00000455659 ZNF571Q7Z3V5 609 aaPredicted RBP7.33□□□□□ -1.24
COMMD1-205ENST00000455659 TMC6Q7Z403 805 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 IRF2BP2Q7Z5L9 587 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 PHLDB2Q86SQ0 1253 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 SYNPOQ8N3V7 929 aa7.33□□□□□ -1.24
COMMD1-205ENST00000455659 SPEM1Q8N4L4 309 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms