RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 PTENP60484 403 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 ARID5AQ03989 594 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 POU5F1BQ06416 359 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 SPIRE1Q08AE8 756 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 GRIK3Q13003 919 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 TUSC3Q13454 348 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 HSP90AA2PQ14568 343 aaPredicted RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 NAB2Q15742 525 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 PSMD5Q16401 504 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 DDR2Q16832 855 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 PFKFB3Q16875 520 aaPredicted RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 SOWAHCQ53LP3 525 aaPredicted RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 FAM78AQ5JUQ0 283 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 VASNQ6EMK4 673 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 NOTUMQ6P988 496 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 PDXDC1Q6P996 788 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 C1orf228Q6PIY5 440 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 APOA5Q6Q788 366 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 VITQ6UXI7 678 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 Q6ZS52 159 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 ARHGEF18Q6ZSZ5 1173 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 MICU3Q86XE3 530 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 RAB11FIP4Q86YS3 637 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 MFSD6LQ8IWD5 586 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 SYNPOQ8N3V7 929 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 NUDT10Q8NFP7 164 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 UHMK1Q8TAS1 419 aaKnown RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 SLC7A14Q8TBB6 771 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 DEPDC1BQ8WUY9 529 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 GAB3Q8WWW8 586 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 PRPF31Q8WWY3 499 aaKnown RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 ING5Q8WYH8 240 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 CCDC51Q96ER9 411 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 NUDT11Q96G61 164 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 NLRP4Q96MN2 994 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 SCNM1Q9BWG6 230 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 KLC2Q9H0B6 622 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 MEGF9Q9H1U4 602 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 UNC45AQ9H3U1 944 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 TRPV4Q9HBA0 871 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 BARX1Q9HBU1 254 aaPredicted RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 ZFP14Q9HCL3 533 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 RBM28Q9NW13 759 aaKnown RBP4.07□□□□□ -1.76
RBM39-220ENST00000455343 MTRRQ9UBK8 725 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 TCEAL9Q9UHQ7 104 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 ADAM29Q9UKF5 820 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 KAT6AQ92794 2004 aa4.07□□□□□ -1.76
RBM39-220ENST00000455343 C2orf16Q68DN1 1984 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 HELZ2Q9BYK8 2649 aaKnown RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 CYP3A7-CYP3A51PA0A087WV96 503 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 WDR27A2RRH5 827 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 MYBPHLA2RUH7 354 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 C4orf47A7E2U8 309 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 TMEM189-UBE2V1I3L0A0 370 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 CDX4O14627 284 aaPredicted RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 PTGESO14684 152 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 CHADO15335 359 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 CHMP2AO43633 222 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 GAS7O60861 476 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 KLHL18O94889 574 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 IGHDP01880 384 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 SRGAP2CP0DJJ0 459 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 FAHP16930 419 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 PTPN2P17706 415 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 ARF4P18085 180 aaPredicted RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 CYP3A7P24462 503 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 AKAP5P24588 427 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 GDI1P31150 447 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 OR1D2P34982 312 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 MPLP40238 635 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 CCR2P41597 374 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 RCAN1P53805 252 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 EPHA5P54756 1037 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 NPEPPSP55786 919 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 PSMC5P62195 406 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 EXOSC10Q01780 885 aaKnown RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 GRIN1Q05586 938 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 FCHO2Q0JRZ9 810 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 LAMTOR4Q0VGL1 99 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 ELAVL2Q12926 359 aaKnown RBP4.06□□□□□ -1.76
RBM39-220ENST00000455343 LRRC32Q14392 662 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 NECTIN1Q15223 517 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 CCDC6Q16204 474 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 NTRK3Q16288 839 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 PLK5Q496M5 336 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 Q4G0T1 1027 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 DGKKQ5KSL6 1271 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 PHF19Q5T6S3 580 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 FAM171A1Q5VUB5 890 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 LRCH2Q5VUJ6 765 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 SLC8B1Q6J4K2 584 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 CD300LGQ6UXG3 332 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 MIER3Q7Z3K6 550 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 CACNA2D4Q7Z3S7 1137 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 SPRED1Q7Z699 444 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 KBTBD6Q86V97 674 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 HOMEZQ8IX15 550 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 EXOC8Q8IYI6 725 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 TCEAL8Q8IYN2 117 aa4.06□□□□□ -1.76
RBM39-220ENST00000455343 RNF149Q8NC42 400 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms