RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CAPN9O14815 690 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 TEX28O15482 410 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 VNN2O95498 520 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 RARGP13631 454 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 PTGIRP43119 386 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 ERVK-21P61565 698 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 OGDHQ02218 1023 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 TAF5Q15542 800 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 PM20D1Q6GTS8 502 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 DENND5BQ6ZUT9 1274 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 TRMT10CQ7L0Y3 403 aaKnown RBP16.45■□□□□ 0.22
SNX17-204ENST00000453453 ARHGAP18Q8N392 663 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 TTC9BQ8N6N2 239 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 TRIM51Q9BSJ1 452 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 BAIAP2L1Q9UHR4 511 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 STAP1Q9ULZ2 295 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 IRAK3Q9Y616 596 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 USP3Q9Y6I4 520 aa16.45■□□□□ 0.22
SNX17-204ENST00000453453 PLXNA3P51805 1871 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 CCDC189A1A4V9 331 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 PSTPIP1O43586 416 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 SNX3O60493 162 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 SUN1O94901 812 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 LTFP02788 710 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 CNPP09543 421 aaKnown RBP16.44■□□□□ 0.22
SNX17-204ENST00000453453 CTNNA2P26232 953 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 BMP8BP34820 402 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 MATKP42679 507 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 PTPN9P43378 593 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 ALDH1A3P47895 512 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 GPR15P49685 360 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 CCNG1P51959 295 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 ZNF252P-AS1Q0IIN9 211 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 CYP1B1Q16678 543 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 HADHQ16836 314 aaKnown RBP16.44■□□□□ 0.22
SNX17-204ENST00000453453 SDHAF4Q5VUM1 108 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 PLPP4Q5VZY2 271 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 RHOT1Q8IXI2 618 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 MICAL1Q8TDZ2 1067 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 RNF25Q96BH1 459 aaPredicted RBP16.44■□□□□ 0.22
SNX17-204ENST00000453453 GRHL1Q9NZI5 618 aa16.44■□□□□ 0.22
SNX17-204ENST00000453453 YBX2Q9Y2T7 364 aaKnown RBP16.44■□□□□ 0.22
SNX17-204ENST00000453453 USP15Q9Y4E8 981 aaPredicted RBP16.44■□□□□ 0.22
SNX17-204ENST00000453453 YJEFN3A6XGL0 299 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 E7ENQ6 273 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 SOAT2O75908 522 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 LUC7L3O95232 432 aaKnown RBP16.43■□□□□ 0.22
SNX17-204ENST00000453453 KLRC2P26717 231 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 YWHAQP27348 245 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 NOS2P35228 1153 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 CCDC15Q0P6D6 951 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 PLD1Q13393 1074 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 GPM6BQ13491 265 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 VEPH1Q14D04 833 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 E2F5Q15329 346 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 DCAF12L1Q5VU92 463 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 PDE12Q6L8Q7 609 aaKnown RBP16.43■□□□□ 0.22
SNX17-204ENST00000453453 APLFQ8IW19 511 aaPredicted RBP16.43■□□□□ 0.22
SNX17-204ENST00000453453 TCEAL8Q8IYN2 117 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 DEFB106AQ8N104 65 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 SCAMP5Q8TAC9 235 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 MDM1Q8TC05 714 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 NDRG1Q92597 394 aaKnown RBP16.43■□□□□ 0.22
SNX17-204ENST00000453453 KHSRPQ92945 711 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNX17-204ENST00000453453 CD101Q93033 1021 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 KLHL5Q96PQ7 755 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 SLC2A13Q96QE2 648 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 DDX23Q9BUQ8 820 aaKnown RBP16.43■□□□□ 0.22
SNX17-204ENST00000453453 CRISPLD1Q9H336 500 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 RRN3Q9NYV6 651 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 SCML2Q9UQR0 700 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 GREB1Q4ZG55 1949 aa16.43■□□□□ 0.22
SNX17-204ENST00000453453 ZNF638Q14966 1978 aaKnown RBP16.43■□□□□ 0.22
SNX17-204ENST00000453453 ARHGEF15O94989 841 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 ERVFC1P60507 584 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 NCALDP61601 193 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 TAF12Q16514 161 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 CDO1Q16878 200 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 CCDC14Q49A88 953 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 DCAF6Q58WW2 860 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 PPP2R2DQ66LE6 453 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 MRPL43Q8N983 215 aaKnown RBP16.42■□□□□ 0.22
SNX17-204ENST00000453453 CFAP61Q8NHU2 1237 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 FBXO32Q969P5 355 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 CFAP57Q96MR6 1250 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 SERPINB12Q96P63 405 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 PBX4Q9BYU1 374 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 NKX2-4Q9H2Z4 354 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 YIPF1Q9Y548 306 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 PCDHA3Q9Y5H8 950 aa16.42■□□□□ 0.22
SNX17-204ENST00000453453 C2orf71A6NGG8 1288 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 SLC38A8A6NNN8 435 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 H3BNC9 293 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 RASGRF2O14827 1237 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 SEC24AO95486 1093 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 SHBGP04278 402 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 KRT7P08729 469 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 NCAM1P13591 858 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 PCK1P35558 622 aa16.41■□□□□ 0.22
SNX17-204ENST00000453453 PBX2P40425 430 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms