RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 NCAM1P13591 858 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 SP100P23497 879 aaPredicted RBP9.08□□□□□ -0.96
COL28A1-205ENST00000453441 EIF4A3P38919 411 aaKnown RBP9.08□□□□□ -0.96
COL28A1-205ENST00000453441 MATKP42679 507 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 AMPD2Q01433 879 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 EFEMP1Q12805 493 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 PTP4A2Q12974 167 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 MTF1Q14872 753 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 TRIP4Q15650 581 aaPredicted RBP9.08□□□□□ -0.96
COL28A1-205ENST00000453441 NUGGCQ68CJ6 796 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 TANGO2Q6ICL3 276 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 DNAJC24Q6P3W2 148 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 ALKBH5Q6P6C2 394 aaKnown RBP9.08□□□□□ -0.96
COL28A1-205ENST00000453441 WDR59Q6PJI9 974 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 VITQ6UXI7 678 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 HTR3DQ70Z44 454 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 UNC45BQ8IWX7 931 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 SLC44A3Q8N4M1 653 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 SH3RF2Q8TEC5 729 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 CLEC4CQ8WTT0 213 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 AZIN2Q96A70 460 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 SLC22A12Q96S37 553 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 DDX50Q9BQ39 737 aaKnown RBP9.08□□□□□ -0.96
COL28A1-205ENST00000453441 KXD1Q9BQD3 176 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 SELENOOQ9BVL4 669 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 RNF38Q9H0F5 515 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 PARVAQ9NVD7 372 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.08□□□□□ -0.96
COL28A1-205ENST00000453441 RASAL2Q9UJF2 1139 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 TLR6Q9Y2C9 796 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 BDP1A6H8Y1 2624 aa9.08□□□□□ -0.96
COL28A1-205ENST00000453441 UNC80Q8N2C7 3258 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 SIGLEC16A6NMB1 481 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 NFATC1O95644 943 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 IGLV3-25P01717 112 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 FTLP02792 175 aaPredicted RBP9.07□□□□□ -0.96
COL28A1-205ENST00000453441 FYNP06241 537 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 KRT3P12035 628 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 GLULP15104 373 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 SDC4P31431 198 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 CYLC1P35663 651 aaPredicted RBP9.07□□□□□ -0.96
COL28A1-205ENST00000453441 VIPR2P41587 438 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 PTPN9P43378 593 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 IFNAR2P48551 515 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 HARS2P49590 506 aaKnown RBP9.07□□□□□ -0.96
COL28A1-205ENST00000453441 ASTE1Q2TB18 679 aaPredicted RBP9.07□□□□□ -0.96
COL28A1-205ENST00000453441 SLC25A52Q3SY17 297 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 DCAF6Q58WW2 860 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 PLEKHA7Q6IQ23 1121 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 HFE2Q6ZVN8 426 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 SND1Q7KZF4 910 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL28A1-205ENST00000453441 MIB1Q86YT6 1006 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 DEFB106AQ8N104 65 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 LINC00528Q8N1L1 170 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 TXLNBQ8N3L3 684 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 CPA6Q8N4T0 437 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 CCDC112Q8NEF3 446 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 OLIG1Q8TAK6 271 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 CSGALNACT1Q8TDX6 532 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 DQX1Q8TE96 717 aaKnown RBP9.07□□□□□ -0.96
COL28A1-205ENST00000453441 FNIP1Q8TF40 1166 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 OSCP1Q8WVF1 389 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 EDEM1Q92611 657 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 ATP2A3Q93084 1043 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 NT5C3BQ969T7 300 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 PGAP3Q96FM1 320 aaPredicted RBP9.07□□□□□ -0.96
COL28A1-205ENST00000453441 CYP2S1Q96SQ9 504 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 DDX23Q9BUQ8 820 aaKnown RBP9.07□□□□□ -0.96
COL28A1-205ENST00000453441 BRD9Q9H8M2 597 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 FAM204AQ9H8W3 233 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 NHEJ1Q9H9Q4 299 aaPredicted RBP9.07□□□□□ -0.96
COL28A1-205ENST00000453441 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.07□□□□□ -0.96
COL28A1-205ENST00000453441 CFAP97Q9P2B7 532 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 WNT16Q9UBV4 365 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 TJP2Q9UDY2 1190 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 SLC12A6Q9UHW9 1150 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 TMEM59LQ9UK28 342 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 INTUQ9ULD6 942 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 NENFQ9UMX5 172 aa9.07□□□□□ -0.96
COL28A1-205ENST00000453441 C5orf42Q9H799 3197 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 A0A087X0T9 212 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 TCRBV5S1A1TA0A578 114 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 SLC12A8A0AV02 714 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 GOLGA8SH3BPF8 625 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 ERVH48-1M5A8F1 160 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 IRAK2O43187 625 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 DCXO43602 365 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 STC2O76061 302 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 LCA5LO95447 670 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 TRUB2O95900 331 aaKnown RBP9.06□□□□□ -0.96
COL28A1-205ENST00000453441 TBX18O95935 607 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 IGLV3-27P01718 113 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 APOEP02649 317 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 ASGR2P07307 311 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 PLEKP08567 350 aaPredicted RBP9.06□□□□□ -0.96
COL28A1-205ENST00000453441 H2AFZP0C0S5 128 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 FAM228BP0C875 321 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 RRM1P23921 792 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 GDI1P31150 447 aa9.06□□□□□ -0.96
COL28A1-205ENST00000453441 CHKAP35790 457 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms