RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 MROH7Q68CQ1 1323 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 TMEM191CA6NGB0 347 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ZBTB24O43167 697 aaPredicted RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 PDE5AO76074 875 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 CST3P01034 146 aaPredicted RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 SERPINE1P05121 402 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 HOXD10P28358 340 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 NNMTP40261 264 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 SLC1A6P48664 564 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 LHX1P48742 406 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ZNF143P52747 638 aaPredicted RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 NCALDP61601 193 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 DYNC1I2Q13409 638 aaKnown RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 LAMB3Q13751 1172 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 FASTKD3Q14CZ7 662 aaKnown RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 PDPK2PQ6A1A2 396 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 FAM117BQ6P1L5 589 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ABHD15Q6UXT9 468 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 TMPRSS6Q8IU80 811 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ZDHHC17Q8IUH5 632 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 DEFB107AQ8IZN7 70 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 GLMNQ92990 594 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 RNF157Q96PX1 679 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 SNRNP25Q9BV90 132 aaKnown RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 ATXN3LQ9H3M9 355 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ETNK2Q9NVF9 386 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 DMAC2Q9NW81 257 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 GGA2Q9UJY4 613 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ZNF711Q9Y462 761 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 PLIN4Q96Q06 1357 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 A0A096LPK6 155 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 GPR182O15218 404 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ZNF862O60290 1169 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 TRUB2O95900 331 aaKnown RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 POMCP01189 267 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ITGAVP06756 1048 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 MMP8P22894 467 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 NR2C2P49116 596 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 EFEMP1Q12805 493 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ZC3H12AQ5D1E8 599 aaKnown RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 SGO1Q5FBB7 561 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 PTRHD1Q6GMV3 140 aaKnown RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 IYDQ6PHW0 289 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 SZRD1Q7Z422 152 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ATP6V0D2Q8N8Y2 350 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 C12orf29Q8N999 325 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 TDRD5Q8NAT2 981 aaKnown RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 TUBGCP3Q96CW5 907 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 NMD3Q96D46 503 aaKnown RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 SH3GL3Q99963 347 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 GPR63Q9BZJ6 419 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ABHD16BQ9H3Z7 469 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 VTA1Q9NP79 307 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 NT5MQ9NPB1 228 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 THAP1Q9NVV9 213 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 STX18Q9P2W9 335 aaKnown RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 ACTL7BQ9Y614 415 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 UMODL1Q5DID0 1318 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 COL1A1P02452 1464 aaPredicted RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 MAGEA13PA6NCF6 341 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 STX7O15400 261 aaKnown RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 ZMPSTE24O75844 475 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 SLC2A3P11169 496 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 ALADP13716 330 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 NME5P56597 212 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 CDK16Q00536 496 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 DSG1Q02413 1049 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 SPRED3Q2MJR0 410 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 WASHC2DQ5SRD0 308 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 MAP1SQ66K74 1059 aaPredicted RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 IZUMO2Q6UXV1 221 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 SH3TC2Q8TF17 1288 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 LENG9Q96B70 501 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 UBE2OQ9C0C9 1292 aaKnown RBP7.34□□□□□ -1.23
BEST1-202ENST00000449131 ACSS2Q9NR19 701 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 LMCD1Q9NZU5 365 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 STARD13Q9Y3M8 1113 aa7.34□□□□□ -1.23
BEST1-202ENST00000449131 PARP4Q9UKK3 1724 aaKnown RBP7.34□□□□□ -1.24
BEST1-202ENST00000449131 NCAM2O15394 837 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 STRNO43815 780 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 PEX10O60683 326 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 TRIM13O60858 407 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 KRT36O76013 467 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 ESRRBO95718 433 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 ABHD2P08910 425 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 ERVK-10P10266 1014 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 YBX3P16989 372 aaKnown RBP eCLIP7.33□□□□□ -1.24
BEST1-202ENST00000449131 RGS2P41220 211 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 HIRAP54198 1017 aaPredicted RBP7.33□□□□□ -1.24
BEST1-202ENST00000449131 CYLC2Q14093 348 aaPredicted RBP7.33□□□□□ -1.24
BEST1-202ENST00000449131 TRMT5Q32P41 509 aaKnown RBP7.33□□□□□ -1.24
BEST1-202ENST00000449131 HSDL1Q3SXM5 330 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 PTPN20Q4JDL3 420 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 TCHHL1Q5QJ38 904 aaPredicted RBP7.33□□□□□ -1.24
BEST1-202ENST00000449131 MRNIPQ6NTE8 343 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 BNC2Q6ZN30 1099 aaPredicted RBP7.33□□□□□ -1.24
BEST1-202ENST00000449131 PTAR1Q7Z6K3 402 aaPredicted RBP7.33□□□□□ -1.24
BEST1-202ENST00000449131 NT5DC4Q86YG4 428 aa7.33□□□□□ -1.24
BEST1-202ENST00000449131 CYGBQ8WWM9 190 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms