RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 NNTQ13423 1086 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 PIGHQ14442 188 aaPredicted RBP12.31□□□□□ -0.44
RCL1-208ENST00000448872 TXNRD3NBQ6F5E7 133 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 NADSYN1Q6IA69 706 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 CYP4V2Q6ZWL3 525 aaPredicted RBP12.31□□□□□ -0.44
RCL1-208ENST00000448872 MTSS1LQ765P7 747 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 REXO1L1PQ8IX06 675 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 NIPA2Q8N8Q9 360 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 MYEOVQ96EZ4 313 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 P2RY11Q96G91 374 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 WDCPQ9H6R7 721 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 KIF9Q9HAQ2 790 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 GPATCH2LQ9NWQ4 482 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 ARHGEF38Q9NXL2 777 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 CAPN6Q9Y6Q1 641 aa12.31□□□□□ -0.44
RCL1-208ENST00000448872 MTCL1Q9Y4B5 1905 aaKnown RBP12.3□□□□□ -0.44
RCL1-208ENST00000448872 E2F8A0AVK6 867 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 PAGE1O75459 146 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 F9P00740 461 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 ARSAP15289 507 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 TCF3P15923 654 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 COMTP21964 271 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 SSR1P43307 286 aaKnown RBP12.3□□□□□ -0.44
RCL1-208ENST00000448872 KPNA1P52294 538 aaPredicted RBP12.3□□□□□ -0.44
RCL1-208ENST00000448872 HADHBP55084 474 aaKnown RBP12.3□□□□□ -0.44
RCL1-208ENST00000448872 RING1Q06587 406 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 TNK2Q07912 1038 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 PPP2R5DQ14738 602 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 KCNT1Q5JUK3 1230 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 PIK3R6Q5UE93 754 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 NUGGCQ68CJ6 796 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 CC2D1AQ6P1N0 951 aaPredicted RBP12.3□□□□□ -0.44
RCL1-208ENST00000448872 HTR3DQ70Z44 454 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 SND1Q7KZF4 910 aaKnown RBP eCLIP12.3□□□□□ -0.44
RCL1-208ENST00000448872 DDX42Q86XP3 938 aaKnown RBP eCLIP12.3□□□□□ -0.44
RCL1-208ENST00000448872 MFSD6LQ8IWD5 586 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 SLC44A3Q8N4M1 653 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 TTC8Q8TAM2 541 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 IRX2Q9BZI1 471 aaPredicted RBP12.3□□□□□ -0.44
RCL1-208ENST00000448872 ZWILCHQ9H900 591 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 CD320Q9NPF0 282 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.3□□□□□ -0.44
RCL1-208ENST00000448872 OBP2AQ9NY56 170 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 C2orf16Q68DN1 1984 aa12.3□□□□□ -0.44
RCL1-208ENST00000448872 OTOL1A6NHN0 477 aaPredicted RBP12.29□□□□□ -0.44
RCL1-208ENST00000448872 C19orf67A6NJJ6 358 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 NARSO43776 548 aaKnown RBP12.29□□□□□ -0.44
RCL1-208ENST00000448872 TSPAN3O60637 253 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 PALMO75781 387 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 RNF8O76064 485 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 APOEP02649 317 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 TNNT1P13805 278 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 PSMC3P17980 439 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 GDI1P31150 447 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 SLC6A4P31645 630 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 ADRA1BP35368 520 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 GJC1P36383 396 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 SGSHP51688 502 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 SLC25A11Q02978 314 aaKnown RBP12.29□□□□□ -0.44
RCL1-208ENST00000448872 FCHO2Q0JRZ9 810 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 CA9Q16790 459 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 SMTNL2Q2TAL5 461 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 FAM133BQ5BKY9 247 aaKnown RBP12.29□□□□□ -0.44
RCL1-208ENST00000448872 RAP1GAP2Q684P5 730 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 RFWD3Q6PCD5 774 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 C14orf80Q86SX3 495 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 DAAM2Q86T65 1068 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.29□□□□□ -0.44
RCL1-208ENST00000448872 UNC45BQ8IWX7 931 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 PYROXD2Q8N2H3 581 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 TXLNBQ8N3L3 684 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 LRRC57Q8N9N7 239 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 BHMTQ93088 406 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 FAM83CQ9BQN1 747 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 TSGA10Q9BZW7 698 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 EBF3Q9H4W6 596 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 KLHL11Q9NVR0 708 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 DUS2Q9NX74 493 aaKnown RBP12.29□□□□□ -0.44
RCL1-208ENST00000448872 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
RCL1-208ENST00000448872 PRKAG3Q9UGI9 489 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 LSM7Q9UK45 103 aaKnown RBP12.29□□□□□ -0.44
RCL1-208ENST00000448872 USP18Q9UMW8 372 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 HS3ST4Q9Y661 456 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 ALG6Q9Y672 507 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 BRWD1Q9NSI6 2320 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 GREB1Q4ZG55 1949 aa12.29□□□□□ -0.44
RCL1-208ENST00000448872 FAM72CH0Y354 149 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 KRT86O43790 486 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 PRPSAP2O60256 369 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 ACSL4O60488 711 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 MAN1A1P33908 653 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 PCK1P35558 622 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 SLC11A2P49281 568 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 IRAK1P51617 712 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 ACAP1Q15027 740 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 EML3Q32P44 896 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 ATP13A4Q4VNC1 1196 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 ARHGAP29Q52LW3 1261 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 MS4A13Q5J8X5 152 aa12.28□□□□□ -0.44
RCL1-208ENST00000448872 BRMS1LQ5PSV4 323 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms