RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 UBXN6Q9BZV1 441 aa13.08□□□□□ -0.32
SSR4-205ENST00000447375 PNPLA8Q9NP80 782 aa13.08□□□□□ -0.32
SSR4-205ENST00000447375 TRPM5Q9NZQ8 1165 aa13.08□□□□□ -0.32
SSR4-205ENST00000447375 APEX2Q9UBZ4 518 aa13.08□□□□□ -0.32
SSR4-205ENST00000447375 CAPN8A6NHC0 703 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 ADAM23O75077 832 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 CKMP06732 381 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 ZNF18P17022 549 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 PFKLP17858 780 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 SLC5A3P53794 718 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 MFAP3P55082 362 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 KCNMA1Q12791 1236 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 CAMK2BQ13554 666 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 KRT31Q15323 416 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 GAB4Q2WGN9 574 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 SGO2Q562F6 1265 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 SNX30Q5VWJ9 437 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 DPY19L2P1Q6NXN4 242 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 SLC41A1Q8IVJ1 513 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 SFTPA1Q8IWL2 248 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 RGL4Q8IZJ4 473 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 PDCD7Q8N8D1 485 aaKnown RBP13.07□□□□□ -0.32
SSR4-205ENST00000447375 SH3RF2Q8TEC5 729 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 OVCA2Q8WZ82 227 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 SLITRK1Q96PX8 696 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 HSD3B7Q9H2F3 369 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 SIX2Q9NPC8 291 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 ZDHHC4Q9NPG8 344 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 CHORDC1Q9UHD1 332 aaPredicted RBP13.07□□□□□ -0.32
SSR4-205ENST00000447375 NAV2Q8IVL1 2488 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 PTPRBP23467 1997 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 GON4LQ3T8J9 2241 aa13.07□□□□□ -0.32
SSR4-205ENST00000447375 O00370 1275 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 ATXN1LP0C7T5 689 aaKnown RBP13.06□□□□□ -0.32
SSR4-205ENST00000447375 ZDHHC11BP0C7U3 371 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 CD19P15391 556 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 GNSP15586 552 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 SLC6A11P48066 632 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 KIF11P52732 1056 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 APBA1Q02410 837 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 CFHR1Q03591 330 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 CNGA2Q16280 664 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 GJB7Q6PEY0 223 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 LCLAT1Q6UWP7 414 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 GPRIN1Q7Z2K8 1008 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 RBBP8NLQ8NC74 664 aaPredicted RBP13.06□□□□□ -0.32
SSR4-205ENST00000447375 PDZD8Q8NEN9 1154 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 TFAP2BQ92481 460 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 HSPA12BQ96MM6 686 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 FCRL3Q96P31 734 aaPredicted RBP13.06□□□□□ -0.32
SSR4-205ENST00000447375 PNKPQ96T60 521 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 ZSWIM1Q9BR11 485 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 ZDHHC5Q9C0B5 715 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 VPS16Q9H269 839 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 FBXO44Q9H4M3 255 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 CLMPQ9H6B4 373 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 TOR4AQ9NXH8 423 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 TAB2Q9NYJ8 693 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 SUSD2Q9UGT4 822 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 LIMA1Q9UHB6 759 aaKnown RBP13.06□□□□□ -0.32
SSR4-205ENST00000447375 TSPAN16Q9UKR8 245 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 SCML2Q9UQR0 700 aa13.06□□□□□ -0.32
SSR4-205ENST00000447375 SYCE3A1L190 88 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 FAM149AA5PLN7 773 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 C2orf78A6NCI8 922 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 GOLGA8CPA6NN73 597 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 DKK1O94907 266 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 KAT7O95251 611 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 APODP05090 189 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 CHRM1P11229 460 aaPredicted RBP13.05□□□□□ -0.32
SSR4-205ENST00000447375 HDCP19113 662 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 KIR2DL1P43626 348 aaPredicted RBP13.05□□□□□ -0.32
SSR4-205ENST00000447375 ZNF165P49910 485 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 PDE6CP51160 858 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 SLC8A3P57103 927 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 GRIK2Q13002 908 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 STILQ15468 1287 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 GOLGA7BQ2TAP0 167 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 PKDCCQ504Y2 493 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 LRRC69Q6ZNQ3 347 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 APTXQ7Z2E3 356 aaKnown RBP13.05□□□□□ -0.32
SSR4-205ENST00000447375 DHX40Q8IX18 779 aaKnown RBP13.05□□□□□ -0.32
SSR4-205ENST00000447375 AOPEPQ8N6M6 819 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 ARL14EPQ8N8R7 260 aaPredicted RBP13.05□□□□□ -0.32
SSR4-205ENST00000447375 SHC3Q92529 594 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 FBXO32Q969P5 355 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 RNF38Q9H0F5 515 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 PRDM16Q9HAZ2 1276 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 CALCOCO1Q9P1Z2 691 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 HESX1Q9UBX0 185 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 USP3Q9Y6I4 520 aa13.05□□□□□ -0.32
SSR4-205ENST00000447375 A0A0A0MRY4 1105 aa13.04□□□□□ -0.32
SSR4-205ENST00000447375 IGHV1OR15-9A0A0B4J2B8 117 aa13.04□□□□□ -0.32
SSR4-205ENST00000447375 SMTNL1A8MU46 457 aa13.04□□□□□ -0.32
SSR4-205ENST00000447375 BECN2A8MW95 431 aa13.04□□□□□ -0.32
SSR4-205ENST00000447375 PES1O00541 588 aaKnown RBP13.04□□□□□ -0.32
SSR4-205ENST00000447375 XPO1O14980 1071 aaKnown RBP13.04□□□□□ -0.32
SSR4-205ENST00000447375 OLFM2O95897 454 aa13.04□□□□□ -0.32
SSR4-205ENST00000447375 OAS1P00973 400 aaKnown RBP13.04□□□□□ -0.32
SSR4-205ENST00000447375 TPM2P07951 284 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms