RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 EBNA1BP2Q99848 306 aaKnown RBP14.67□□□□□ -0.06
ERCC3-203ENST00000445889 SPATA16Q9BXB7 569 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 S100A14Q9HCY8 104 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 THAP1Q9NVV9 213 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 DDX43Q9NXZ2 648 aaKnown RBP14.67□□□□□ -0.06
ERCC3-203ENST00000445889 APOBEC2Q9Y235 224 aaKnown RBP14.67□□□□□ -0.06
ERCC3-203ENST00000445889 ENDOD1O94919 500 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 STAG3L1P0CL83 205 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 CYP2F1P24903 491 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 GRIA2P42262 883 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 AP3M2P53677 418 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 TRIP10Q15642 601 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 LIN52Q52LA3 116 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 EFHC1Q5JVL4 640 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 RABGAP1LQ5R372 815 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 PPP1R26Q5T8A7 1209 aaPredicted RBP14.67□□□□□ -0.06
ERCC3-203ENST00000445889 NCAPG2Q86XI2 1143 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 TRIM42Q8IWZ5 723 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 TP53INP2Q8IXH6 220 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 RTKN2Q8IZC4 609 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 AGBL3Q8NEM8 1001 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 HPDLQ96IR7 371 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 FRMD8P1Q9BZ68 369 aaPredicted RBP14.67□□□□□ -0.06
ERCC3-203ENST00000445889 TMEM216Q9P0N5 145 aa14.67□□□□□ -0.06
ERCC3-203ENST00000445889 FGF3P11487 239 aaPredicted RBP14.66□□□□□ -0.06
ERCC3-203ENST00000445889 CRHR1P34998 444 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 TUBB3Q13509 450 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 CCNIQ14094 377 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 Q3C1V9 767 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 GRAMD1BQ3KR37 738 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 FRMD7Q6ZUT3 714 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 FLAD1Q8NFF5 587 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 GCNAQ96QF7 691 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 IFT122Q9HBG6 1241 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 PPP1R1BQ9UD71 204 aaPredicted RBP14.66□□□□□ -0.06
ERCC3-203ENST00000445889 GINS2Q9Y248 185 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 SPAG6O75602 509 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 DGKIO75912 1065 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 PFKMP08237 780 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 MGAT1P26572 445 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 EFNA5P52803 228 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 MSLNQ13421 630 aaPredicted RBP14.66□□□□□ -0.06
ERCC3-203ENST00000445889 GOLGA7BQ2TAP0 167 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 GJC2Q5T442 439 aaPredicted RBP14.66□□□□□ -0.06
ERCC3-203ENST00000445889 MBLAC2Q68D91 279 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 EFCAB12Q6NXP0 572 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 MAP7D3Q8IWC1 876 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 MICALL2Q8IY33 904 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 GDPD5Q8WTR4 605 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 PPP2R3CQ969Q6 453 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 NMD3Q96D46 503 aaKnown RBP14.66□□□□□ -0.06
ERCC3-203ENST00000445889 AGAP3Q96P47 875 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 BCO2Q9BYV7 579 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 UBE2OQ9C0C9 1292 aaKnown RBP14.66□□□□□ -0.06
ERCC3-203ENST00000445889 CLIC5Q9NZA1 410 aa14.66□□□□□ -0.06
ERCC3-203ENST00000445889 ZBTB42B2RXF5 422 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 NOP56O00567 594 aaKnown RBP14.65□□□□□ -0.06
ERCC3-203ENST00000445889 TSHRP16473 764 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 CCNFP41002 786 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 CCR10P46092 362 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 IDH3AP50213 366 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 COPAP53621 1224 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 MED21Q13503 144 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 PPP2R5DQ14738 602 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 DLG2Q15700 870 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 FAM47CQ5HY64 1035 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 WDR78Q5VTH9 848 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 DHDDSQ86SQ9 333 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 SATL1Q86VE3 508 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 SEPT1Q8WYJ6 367 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 NRDE2Q9H7Z3 1164 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 PNPLA8Q9NP80 782 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 GOLGA8TH3BQL2 631 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 NEMP1O14524 444 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 GABBR2O75899 941 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 RAG1P15918 1043 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 SAT1P21673 171 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 SDC4P31431 198 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 ABCD1P33897 745 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 CDK7P50613 346 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 HDAC4P56524 1084 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 FAM91A1Q658Y4 838 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 PAOXQ6QHF9 649 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 FAM192AQ9GZU8 254 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 CAB39LQ9H9S4 337 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 XPNPEP3Q9NQH7 507 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 ZNF180Q9UJW8 692 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 ARID2Q68CP9 1835 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.65□□□□□ -0.06
ERCC3-203ENST00000445889 SOWAHBA6NEL2 793 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 CAPN8A6NHC0 703 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 FAM159BA6NKW6 160 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 TRDMT1O14717 391 aaKnown RBP14.65□□□□□ -0.06
ERCC3-203ENST00000445889 PPEF2O14830 753 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 B4GALT4O60513 344 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 IL1BP01584 269 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 SERPINB5P36952 375 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 TREML2Q5T2D2 321 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 IER5Q5VY09 327 aa14.65□□□□□ -0.06
ERCC3-203ENST00000445889 CATSPERGQ6ZRH7 1159 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms