RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 RWDD3Q9Y3V2 267 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 MYBL2P10244 700 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 ETS2P15036 469 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 MAPK1P28482 360 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 ITGA1P56199 1179 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 ATF7IP2Q5U623 682 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 UGT3A1Q6NUS8 523 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 BHLHE22Q8NFJ8 381 aaPredicted RBP19.09■□□□□ 0.65
SHANK3-203ENST00000445220 OR7A2PQ8NGA2 310 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 UBA2Q9UBT2 640 aaPredicted RBP19.09■□□□□ 0.65
SHANK3-203ENST00000445220 TRMT6Q9UJA5 497 aaKnown RBP19.09■□□□□ 0.65
SHANK3-203ENST00000445220 MKL2Q9ULH7 1088 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 NDUFAF1Q9Y375 327 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 PCDHA3Q9Y5H8 950 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 RGL2O15211 777 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 SSTR1P30872 391 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 SEC23AQ15436 765 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 PERM1Q5SV97 790 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 DGCR6LQ9BY27 220 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 WWOXQ9NZC7 414 aa19.09■□□□□ 0.65
SHANK3-203ENST00000445220 S100A9P06702 114 aaKnown RBP19.08■□□□□ 0.65
SHANK3-203ENST00000445220 CDK7P50613 346 aa19.08■□□□□ 0.65
SHANK3-203ENST00000445220 CCNHP51946 323 aaPredicted RBP19.08■□□□□ 0.65
SHANK3-203ENST00000445220 VEPH1Q14D04 833 aa19.08■□□□□ 0.65
SHANK3-203ENST00000445220 POLD3Q15054 466 aaPredicted RBP19.08■□□□□ 0.65
SHANK3-203ENST00000445220 GOLGA7BQ2TAP0 167 aa19.08■□□□□ 0.65
SHANK3-203ENST00000445220 PARK7Q99497 189 aaKnown RBP19.08■□□□□ 0.65
SHANK3-203ENST00000445220 EPS8Q12929 822 aa19.08■□□□□ 0.65
SHANK3-203ENST00000445220 C2CD6Q53TS8 623 aa19.08■□□□□ 0.65
SHANK3-203ENST00000445220 ANGEL2Q5VTE6 544 aaKnown RBP19.08■□□□□ 0.65
SHANK3-203ENST00000445220 ZNF57Q68EA5 555 aaPredicted RBP19.08■□□□□ 0.65
SHANK3-203ENST00000445220 ZCCHC9Q8N567 271 aaKnown RBP19.08■□□□□ 0.65
SHANK3-203ENST00000445220 RTL3Q8N8U3 475 aaKnown RBP19.08■□□□□ 0.65
SHANK3-203ENST00000445220 BORCS5Q969J3 196 aa19.08■□□□□ 0.65
SHANK3-203ENST00000445220 SLC25A23Q9BV35 468 aa19.08■□□□□ 0.65
SHANK3-203ENST00000445220 AAR2Q9Y312 384 aaKnown RBP19.08■□□□□ 0.65
SHANK3-203ENST00000445220 RPA3P35244 121 aaPredicted RBP19.08■□□□□ 0.64
SHANK3-203ENST00000445220 TOP3AQ13472 1001 aaPredicted RBP19.08■□□□□ 0.64
SHANK3-203ENST00000445220 AAGABQ6PD74 315 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 FAM45AQ8TCE6 357 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 S100ZQ8WXG8 99 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 RNF145Q96MT1 663 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 RUSC1Q9BVN2 902 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 UGT2B28Q9BY64 529 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 TRIM39Q9HCM9 518 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 SLC38A7Q9NVC3 462 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 ERAP1Q9NZ08 941 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 VIL1P09327 827 aaKnown RBP19.08■□□□□ 0.64
SHANK3-203ENST00000445220 NUDT17P0C025 328 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 ACAP1Q15027 740 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 ACCSLQ4AC99 568 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 KYAT3Q6YP21 454 aaKnown RBP19.08■□□□□ 0.64
SHANK3-203ENST00000445220 TBC1D19Q8N5T2 526 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 ARL10Q8N8L6 244 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 ZDHHC15Q96MV8 337 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 TBX20Q9UMR3 447 aa19.08■□□□□ 0.64
SHANK3-203ENST00000445220 SLC37A4O43826 429 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 CPB1P15086 417 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 GP5P40197 560 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 TIMM50Q3ZCQ8 353 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.07■□□□□ 0.64
SHANK3-203ENST00000445220 NMRK1Q9NWW6 199 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 LRRC10BA6NIK2 292 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 ALOX5P09917 674 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 MLNP12872 115 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 ZDHHC13Q8IUH4 622 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 C8orf59Q8N0T1 100 aaPredicted RBP19.07■□□□□ 0.64
SHANK3-203ENST00000445220 HPS4Q9NQG7 708 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 NWD1Q149M9 1564 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 HS6ST1O60243 411 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 AKAP3O75969 853 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 PARNO95453 639 aaKnown RBP19.07■□□□□ 0.64
SHANK3-203ENST00000445220 IFNA14P01570 189 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 SHBGP04278 402 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 SREBF1P36956 1147 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 BROXQ5VW32 411 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 NUAK2Q9H093 628 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 TIMMDC1Q9NPL8 285 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 SPASTQ9UBP0 616 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 PMPCBO75439 489 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 DDHD2O94830 711 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 KRT6AP02538 564 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 MAGEA10P43363 369 aaPredicted RBP19.07■□□□□ 0.64
SHANK3-203ENST00000445220 GJA8P48165 433 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 SLC16A1P53985 500 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 HPCAP84074 193 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 GANCQ8TET4 914 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 PRRG3Q9BZD7 231 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 DUSP12Q9UNI6 340 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 SPATA31D1Q6ZQQ2 1576 aa19.07■□□□□ 0.64
SHANK3-203ENST00000445220 ABCB1P08183 1280 aaPredicted RBP19.06■□□□□ 0.64
SHANK3-203ENST00000445220 HK2P52789 917 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 CACNB2Q08289 660 aaPredicted RBP19.06■□□□□ 0.64
SHANK3-203ENST00000445220 FAAP100Q0VG06 881 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 DGKKQ5KSL6 1271 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 MIER2Q8N344 545 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 NUDT12Q9BQG2 462 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 GANQ9H2C0 597 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 GGA3Q9NZ52 723 aa19.06■□□□□ 0.64
SHANK3-203ENST00000445220 POLG2Q9UHN1 485 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms