RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 PAQR9Q6ZVX9 377 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 BEND5Q7L4P6 421 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 STRADAQ7RTN6 431 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 HDXQ7Z353 690 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 DEFB128Q7Z7B8 93 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PIGZQ86VD9 579 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PSTKQ8IV42 348 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 GALNT12Q8IXK2 581 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 KLHL7Q8IXQ5 586 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 LRRC43Q8N309 656 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 C12orf50Q8NA57 414 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 KCTD6Q8NC69 237 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CMASQ8NFW8 434 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 JOSD2Q8TAC2 188 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 C2orf15Q8WU43 125 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 TEKT4Q8WW24 435 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 RXFP2Q8WXD0 754 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CENPIQ92674 756 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLCO2A1Q92959 643 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 MYLPFQ96A32 169 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 MAGOHBQ96A72 148 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PCED1BQ96HM7 432 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 SCLYQ96I15 445 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 FUBP3Q96I24 572 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PKNOX2Q96KN3 472 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CEP295NLQ96MC4 621 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CASD1Q96PB1 797 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLITRK1Q96PX8 696 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PAAF1Q9BRP4 392 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 LRRC1Q9BTT6 524 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 DDX23Q9BUQ8 820 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 AP1M1Q9BXS5 423 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 MAK16Q9BXY0 300 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PBX4Q9BYU1 374 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 OSBPL8Q9BZF1 889 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM129AQ9BZQ8 928 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 TRIM7Q9C029 511 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZCWPW1Q9H0M4 648 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 ACBD3Q9H3P7 528 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 LRRC19Q9H756 370 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 NRDE2Q9H7Z3 1164 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CSNK1G1Q9HCP0 422 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PNPLA8Q9NP80 782 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 DMAP1Q9NPF5 467 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 CNGB3Q9NQW8 809 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 FAM114A2Q9NRY5 505 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 COMMD8Q9NX08 183 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 EHD2Q9NZN4 543 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 STAP1Q9ULZ2 295 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 USP18Q9UMW8 372 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 DRG1Q9Y295 367 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 UTP11Q9Y3A2 253 aaKnown RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 NME7Q9Y5B8 376 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PCDHB5Q9Y5E4 795 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 TIMM13Q9Y5L4 95 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 LTBP2Q14767 1821 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 PATJQ8NI35 1801 aa4.14□□□□□ -1.75
HMGB1P37-201ENST00000439613 NLRC5Q86WI3 1866 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 hCG_1818297A0A087WSY0 165 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 LRRD1A4D1F6 860 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 TULP2O00295 520 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CLDN5O00501 218 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 NRP1O14786 923 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CAPN9O14815 690 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 MDM4O15151 490 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 RAD51CO43502 376 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 HCRTO43612 131 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 DGKIO75912 1065 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 SMNDC1O75940 238 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ENDOD1O94919 500 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 HEXIM1O94992 359 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 RTN3O95197 1032 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 GJB6O95452 261 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 F9P00740 461 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ITGB1P05556 798 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 GALTP07902 379 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 RALAP11233 206 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZFXP17010 805 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF16P17020 682 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 KDELR1P24390 212 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 IGFBP6P24592 240 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 TKTP29401 623 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 MIPP30301 263 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 PPM1AP35813 382 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 GJC1P36383 396 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 COILP38432 576 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 GRIK1P39086 918 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CDKN2BP42772 138 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC11A1P49279 550 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ZNF135P52742 658 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 EPHB4P54760 987 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 BCAR1P56945 870 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 MAP3K7CLP57077 242 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 DAOAP59103 153 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 VSNL1P62760 191 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 RPL10AP62906 217 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 GUCY2DQ02846 1103 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 SLC25A11Q02978 314 aaKnown RBP4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 CAV1Q03135 178 aa4.13□□□□□ -1.75
HMGB1P37-201ENST00000439613 ADIGQ0VDE8 80 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms