RNA–Protein interactions for RNA: ENST00000436436.5

R3HDM1-207, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-207ENST00000436436 TULP3O75386 442 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 KATNA1O75449 491 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 SNUPNO95149 360 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 ALPLP05186 524 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 VCAM1P19320 739 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 IBSPP21815 317 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 AKAP5P24588 427 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 HOXD9P28356 352 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 EPS15P42566 896 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 ME1P48163 572 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 ID2Q02363 134 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 KRT17Q04695 432 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 ERV3-1Q14264 604 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 NPY5RQ15761 445 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 KHDC1LQ5JSQ8 128 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 CCDC181Q5TID7 509 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 FBXO46Q6PJ61 603 aaPredicted RBP3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 UBE2Q1Q7Z7E8 422 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 PIM3Q86V86 326 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 GAS2L3Q86XJ1 694 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 LIX1LQ8IVB5 337 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 MPLKIPQ8TAP9 179 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 PRR25Q96S07 402 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 PRO3102Q9H379 93 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 ASIC5Q9NY37 505 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 HDAC9Q9UKV0 1011 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 MRPS17Q9Y2R5 130 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 TNKSO95271 1327 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 TTC21AQ8NDW8 1320 aa3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 USP42Q9H9J4 1324 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-207ENST00000436436 MAP2P11137 1827 aaKnown RBP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 hCG_2014768A0A024R1R8 64 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 EME2A4GXA9 379 aaPredicted RBP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 TPD52L2O43399 206 aaKnown RBP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 TOMM40O96008 361 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 CRYABP02511 175 aaKnown RBP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 SERPINB2P05120 415 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 GKP32189 559 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 THBS4P35443 961 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 SLC11A2P49281 568 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 UCP3P55916 312 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 HUNKP57058 714 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 NANOS2P60321 138 aaKnown RBP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 RPS13P62277 151 aaKnown RBP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 CFHR1Q03591 330 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 ZNF91Q05481 1191 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 LARS2Q15031 903 aaKnown RBP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 PTPROQ16827 1216 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 CERCAMQ5T4B2 595 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 GORABQ5T7V8 394 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 RNF187Q5TA31 235 aaPredicted RBP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 TMED8Q6PL24 325 aaPredicted RBP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 DLK2Q6UY11 383 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 PTCHD4Q6ZW05 846 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 Q7L0L9 218 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 GPC2Q8N158 579 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 ARFGAP1Q8N6T3 406 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 ACRBPQ8NEB7 543 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 MAP4K1Q92918 833 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 MVB12AQ96EY5 273 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 TRMOQ9BU70 441 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 GLIS2Q9BZE0 524 aaPredicted RBP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 PRDM16Q9HAZ2 1276 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 SNX15Q9NRS6 342 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 ZSCAN32Q9NX65 697 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 PCDHA6Q9UN73 950 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 STXBP5LQ9Y2K9 1186 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 SNX14Q9Y5W7 946 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 HS3ST3B1Q9Y662 390 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 CGNL1Q0VF96 1302 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 PCDH11XQ9BZA7 1347 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 PCDH11YQ9BZA8 1340 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 CD163L1Q9NR16 1453 aa3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 DICER1Q9UPY3 1922 aaKnown RBP3.15□□□□□ -1.91
R3HDM1-207ENST00000436436 CES2O00748 559 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 SMAD6O43541 496 aaKnown RBP3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 PMPCBO75439 489 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 ADORA2AP29274 412 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 CDKN1CP49918 316 aaPredicted RBP3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 PRKAG1P54619 331 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 ANAPC15P60006 121 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 PSG6Q00889 435 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 CCNIQ14094 377 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 RGMBQ6NW40 437 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 TMEM65Q6PI78 240 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 VSTM1Q6UX27 236 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 USP50Q70EL3 339 aaPredicted RBP3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 ANKRD13BQ86YJ7 626 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 DEFB123Q8N688 67 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 LINC01465Q8N7H1 131 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 RAPGEF4Q8WZA2 1011 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 ZFYVE19Q96K21 471 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 NUP88Q99567 741 aaPredicted RBP3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 PIH1D1Q9NWS0 290 aaKnown RBP3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 TMOD3Q9NYL9 352 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 PAXBP1Q9Y5B6 917 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 MAP3K19Q56UN5 1328 aa3.14□□□□□ -1.91
R3HDM1-207ENST00000436436 FER1L6Q2WGJ9 1857 aa3.13□□□□□ -1.91
R3HDM1-207ENST00000436436 CARMIL3Q8ND23 1372 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms