RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PSMC3IPQ9P2W1 217 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPA-206ENST00000429440 EIF3LQ9Y262 564 aaKnown RBP9.13□□□□□ -0.95
CDC42BPA-206ENST00000429440 ALG6Q9Y672 507 aa9.13□□□□□ -0.95
CDC42BPA-206ENST00000429440 FAM237BA0A1B0GVD1 139 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 PRR5-ARHGAP8B1AHC4 643 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 LAD1O00515 517 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 NOL3O60936 208 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 TOMM70O94826 608 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 CDH1P12830 882 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 UCHL3P15374 230 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 EIF2AK2P19525 551 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 ECE1P42892 770 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 KCNJ1P48048 391 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 TMBIM6P55061 237 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 SRP54P61011 504 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 ARHGAP8P85298 464 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 SMARCB1Q12824 385 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 MAPRE1Q15691 268 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 FAM205BPQ63HN1 556 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 KRT80Q6KB66 452 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 DPY19L2P1Q6NXN4 242 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 COLGALT2Q8IYK4 626 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 FIBCD1Q8N539 461 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 LINC00116Q8NCU8 138 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 GALNT11Q8NCW6 608 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 SHKBP1Q8TBC3 707 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 SLC2A14Q8TDB8 520 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 GRK7Q8WTQ7 553 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 TUBA1CQ9BQE3 449 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 NANOGQ9H9S0 305 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 PARVAQ9NVD7 372 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 TXNDC16Q9P2K2 825 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 NUP50Q9UKX7 468 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 GSTTP1A0A1W2PQM5 241 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 PABPN1LA6NDY0 278 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 GOLGA8JA6NMD2 632 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 SLC9A3R1O14745 358 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 ATP2A1O14983 1001 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 PRLP01236 227 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 ATF2P15336 505 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 ZNF26P17031 533 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 SLC9A3P48764 834 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 COPAP53621 1224 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 FUT2Q10981 343 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 TRAF2Q12933 501 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 HSF5Q4G112 596 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 UBE2UQ5VVX9 321 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 ATG16L1Q676U5 607 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 ZCCHC8Q6NZY4 707 aaKnown RBP9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 NEK5Q6P3R8 708 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 PIK3AP1Q6ZUJ8 805 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 IFNL1Q8IU54 200 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 HERC6Q8IVU3 1022 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 TMEM151BQ8IW70 566 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 ANKRD13AQ8IZ07 590 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 ZNF654Q8IZM8 581 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 CLYBLQ8N0X4 340 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 FBXL6Q8N531 539 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 BANPQ8N9N5 519 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 GRIN3AQ8TCU5 1115 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 TCP10LQ8TDR4 215 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 LRRC15Q8TF66 581 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 S100ZQ8WXG8 99 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 ASIC4Q96FT7 647 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 SH3YL1Q96HL8 342 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 C9orf72Q96LT7 481 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 LPIN3Q9BQK8 851 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 GON7Q9BXV9 100 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 EMILIN2Q9BXX0 1053 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 CCSER2Q9H7U1 834 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 MAGEE1Q9HCI5 957 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 ANLNQ9NQW6 1124 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 MAU2Q9Y6X3 613 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 COL24A1Q17RW2 1714 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 MYO3BQ8WXR4 1341 aa9.12□□□□□ -0.95
CDC42BPA-206ENST00000429440 A0A1W2PPM1 405 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 KRT10P13645 584 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 CD9P21926 228 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 SERPINB1P30740 379 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 IDUAP35475 653 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 KCNQ4P56696 695 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 COPZ1P61923 177 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 OCA2Q04671 838 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 KCNA1Q09470 495 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 ERFEQ4G0M1 354 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 SHEQ5VZ18 495 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 AADACL2Q6P093 401 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 UNC5AQ6ZN44 842 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 SMIM5Q71RC9 77 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 DNAAF5Q86Y56 855 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 CMTR1Q8N1G2 835 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 FAM109AQ8N4B1 249 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 C1orf74Q96LT6 269 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 EFHD1Q9BUP0 239 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 NPLQ9BXD5 320 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 ANKRD60Q9BZ19 345 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 WNT8AQ9H1J5 351 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 SLA2Q9H6Q3 261 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 DNAJC18Q9H819 358 aa9.11□□□□□ -0.95
CDC42BPA-206ENST00000429440 WASH6PQ9NQA3 447 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms