RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 AMHP03971 560 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 PSMB4P28070 264 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 OR1E1P30953 314 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 RPL9P32969 192 aaKnown RBP11.36□□□□□ -0.59
HIPK2-203ENST00000428878 CDKN2BP42772 138 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 EFTUD2Q15029 972 aaKnown RBP eCLIP11.36□□□□□ -0.592e-8■■■■□ 22.7
HIPK2-203ENST00000428878 CDKL3Q8IVW4 592 aaPredicted RBP11.36□□□□□ -0.59
HIPK2-203ENST00000428878 TMEM86AQ8N2M4 240 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 PNPLA1Q8N8W4 532 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 PCDH19Q8TAB3 1148 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 DQX1Q8TE96 717 aaKnown RBP11.36□□□□□ -0.59
HIPK2-203ENST00000428878 TSNARE1Q96NA8 513 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 PPP1R10Q96QC0 940 aaKnown RBP11.36□□□□□ -0.59
HIPK2-203ENST00000428878 GCNAQ96QF7 691 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 SMC6Q96SB8 1091 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 LHX5Q9H2C1 402 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 PCDHB12Q9Y5F1 795 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 MAP1BP46821 2468 aaKnown RBP11.36□□□□□ -0.59
HIPK2-203ENST00000428878 PRR23AA6NEV1 266 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 ARHGAP42A6NI28 874 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 GRXCR1A8MXD5 290 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 FAM72CH0Y354 149 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 CCL16O15467 120 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 CCR1P32246 355 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 HARS2P49590 506 aaKnown RBP11.36□□□□□ -0.59
HIPK2-203ENST00000428878 ZSCAN26Q16670 478 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 FAM72AQ5TYM5 149 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 NUGGCQ68CJ6 796 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 FAM72DQ6L9T8 149 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 FAM72BQ86X60 149 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 NAT16Q8N8M0 369 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 BBOF1Q8ND07 529 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 ZNF669Q96BR6 464 aaPredicted RBP11.36□□□□□ -0.59
HIPK2-203ENST00000428878 RUNDC3BQ96NL0 473 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 TM6SF2Q9BZW4 377 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 ETNK1Q9HBU6 452 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 UBN1Q9NPG3 1134 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 PCDHGC3Q9UN70 934 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 NME7Q9Y5B8 376 aa11.36□□□□□ -0.59
HIPK2-203ENST00000428878 TYW5A2RUC4 315 aaKnown RBP11.35□□□□□ -0.59
HIPK2-203ENST00000428878 H0Y626 953 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 HSPA1AP0DMV8 641 aaKnown RBP11.35□□□□□ -0.59
HIPK2-203ENST00000428878 HSPA1BP0DMV9 641 aaKnown RBP11.35□□□□□ -0.59
HIPK2-203ENST00000428878 ITIH2P19823 946 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 SCNN1BP51168 640 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 PRPSAP1Q14558 356 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 TCEA2Q15560 299 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 RNF19BQ6ZMZ0 732 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 TAOK1Q7L7X3 1001 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 TMC3Q7Z5M5 1100 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 BLOC1S5Q8TDH9 187 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 SGF29Q96ES7 293 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 SHCBP1LQ9BZQ2 653 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 RBM22Q9NW64 420 aaKnown RBP eCLIP11.35□□□□□ -0.59
HIPK2-203ENST00000428878 TRPM5Q9NZQ8 1165 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 MARCOQ9UEW3 520 aaPredicted RBP11.35□□□□□ -0.59
HIPK2-203ENST00000428878 TCRBV7S3A2A0A539 114 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 EBAG9O00559 213 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 PPP1R12AO14974 1030 aaPredicted RBP11.35□□□□□ -0.59
HIPK2-203ENST00000428878 ADAM12O43184 909 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 PAGE1O75459 146 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 CLTBP09497 229 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 AVPR1AP37288 418 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 FNTAP49354 379 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 SLC12A2P55011 1212 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 DPYSL3Q14195 570 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 LINGO4Q6UY18 593 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 NPAS4Q8IUM7 802 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 FBF1Q8TES7 1133 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 BADQ92934 168 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 HSFY1Q96LI6 401 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 CSPG4P5Q96PW8 444 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 ELAC2Q9BQ52 826 aaKnown RBP11.35□□□□□ -0.59
HIPK2-203ENST00000428878 FTHL17Q9BXU8 183 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 DCTN4Q9UJW0 460 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 DSEQ9UL01 958 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 RAB21Q9UL25 225 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 FSCN2O14926 492 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 KCNE1P15382 129 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 KCNQ1P51787 676 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 IFT88Q13099 833 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 LHX8Q68G74 356 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 OLFML1Q6UWY5 402 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 C10orf67Q8IYJ2 551 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 NUP93Q8N1F7 819 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 CABS1Q96KC9 395 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 ATP6V1G3Q96LB4 118 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 HNRNPABQ99729 332 aaKnown RBP11.35□□□□□ -0.59
HIPK2-203ENST00000428878 TMEM161AQ9NX61 479 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 BRWD1Q9NSI6 2320 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 UBA6A0AVT1 1052 aaPredicted RBP11.35□□□□□ -0.59
HIPK2-203ENST00000428878 LRIG2O94898 1065 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 DAOAP59103 153 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 CYP4F8P98187 520 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 USP41Q3LFD5 358 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 ALS2CLQ60I27 953 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 SLC39A5Q6ZMH5 540 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 OTOP3Q7RTS5 596 aa11.35□□□□□ -0.59
HIPK2-203ENST00000428878 TMEM199Q8N511 208 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms