RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 MTIF2P46199 727 aaKnown RBP13.32□□□□□ -0.28
SGCE-203ENST00000425444 PLA2G4AP47712 749 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 SLC6A11P48066 632 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 YWHAGP61981 247 aaKnown RBP eCLIP13.32□□□□□ -0.28
SGCE-203ENST00000425444 GCNT1Q02742 428 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 EFEMP1Q12805 493 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 DUOXA1Q1HG43 343 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 GAB4Q2WGN9 574 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 RAB41Q5JT25 222 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 HTR3DQ70Z44 454 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 SCD5Q86SK9 330 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 C12orf40Q86WS4 652 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 CCDC33Q8N5R6 958 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 NAT16Q8N8M0 369 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 OLIG1Q8TAK6 271 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 LMO3Q8TAP4 145 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 CEP76Q8TAP6 659 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 DACH1Q9UI36 760 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 STRIP2Q9ULQ0 834 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 PTPRBP23467 1997 aa13.32□□□□□ -0.28
SGCE-203ENST00000425444 COL6A6A6NMZ7 2263 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 NEDD8-MDP1E9PL57 170 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 HOXC11O43248 304 aaPredicted RBP13.31□□□□□ -0.28
SGCE-203ENST00000425444 KAT7O95251 611 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 HMBSP08397 361 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 SERPINF2P08697 491 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 KRT5P13647 590 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 LCP1P13796 627 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 BRD2P25440 801 aaKnown RBP13.31□□□□□ -0.28
SGCE-203ENST00000425444 HOXD12P35452 270 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 STILQ15468 1287 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 CRY1Q16526 586 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 PREPLQ4J6C6 727 aaPredicted RBP13.31□□□□□ -0.28
SGCE-203ENST00000425444 SPDYCQ5MJ68 293 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 LCLAT1Q6UWP7 414 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 TPGS1Q6ZTW0 290 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 FRMD1Q8N878 549 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 USP33Q8TEY7 942 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 RNF139Q8WU17 664 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 CRACR2AQ9BSW2 395 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 BBS2Q9BXC9 721 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 BCCIPQ9P287 314 aaKnown RBP eCLIP13.31□□□□□ -0.28
SGCE-203ENST00000425444 MMP17Q9ULZ9 603 aa13.31□□□□□ -0.28
SGCE-203ENST00000425444 APOBEC2Q9Y235 224 aaKnown RBP13.31□□□□□ -0.28
SGCE-203ENST00000425444 K7EQS6 105 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 ARHGAP33O14559 1287 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 GRIA2P42262 883 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 RGS7P49802 495 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 COG7P83436 770 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 CYP4F3Q08477 520 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 DPCR1Q3MIW9 517 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 NUDT18Q6ZVK8 323 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 TMEM25Q86YD3 366 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 FAM114A1Q8IWE2 563 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 DEFB119Q8N690 84 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 TFAP2BQ92481 460 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 KREMEN1Q96MU8 473 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 XPO6Q96QU8 1125 aaKnown RBP13.3□□□□□ -0.28
SGCE-203ENST00000425444 CAPN10Q9HC96 672 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 POLMQ9NP87 494 aaPredicted RBP13.3□□□□□ -0.28
SGCE-203ENST00000425444 UBE2TQ9NPD8 197 aaPredicted RBP13.3□□□□□ -0.28
SGCE-203ENST00000425444 DNAJC17Q9NVM6 304 aaKnown RBP13.3□□□□□ -0.28
SGCE-203ENST00000425444 MARCH2Q9P0N8 246 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 DEC1Q9P2X7 70 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 DKK4Q9UBT3 224 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.3□□□□□ -0.28
SGCE-203ENST00000425444 ZNF510Q9Y2H8 683 aa13.3□□□□□ -0.28
SGCE-203ENST00000425444 MYO18AQ92614 2054 aaKnown RBP13.3□□□□□ -0.28
SGCE-203ENST00000425444 A0A087WV48 116 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 SLC12A8A0AV02 714 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 TBC1D3BA6NDS4 549 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 J3QKU1 62 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 RNF225M0QZC1 329 aaPredicted RBP13.29□□□□□ -0.28
SGCE-203ENST00000425444 PIK3R2O00459 728 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 ATXN7O15265 892 aaPredicted RBP13.29□□□□□ -0.28
SGCE-203ENST00000425444 GREM1O60565 184 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 TULP3O75386 442 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 STC2O76061 302 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 CALCAP01258 141 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 SYPP08247 313 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 CORO1AP31146 461 aaKnown RBP13.29□□□□□ -0.28
SGCE-203ENST00000425444 TIE1P35590 1138 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 ABCG1P45844 678 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 MFAP3P55082 362 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 MRPS21P82921 87 aaKnown RBP13.29□□□□□ -0.28
SGCE-203ENST00000425444 MESP2Q0VG99 397 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 SLC14A1Q13336 389 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 BYSLQ13895 437 aaKnown RBP13.29□□□□□ -0.28
SGCE-203ENST00000425444 CNGA2Q16280 664 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 C10orf76Q5T2E6 689 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 PEAR1Q5VY43 1037 aaPredicted RBP13.29□□□□□ -0.28
SGCE-203ENST00000425444 PM20D1Q6GTS8 502 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 GRAMD4Q6IC98 578 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 TMEM92Q6UXU6 159 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 GBP6Q6ZN66 633 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 TOGARAM2Q6ZUX3 1019 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 ENOSF1Q7L5Y1 443 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 RABEPKQ7Z6M1 372 aa13.29□□□□□ -0.28
SGCE-203ENST00000425444 SLCO6A1Q86UG4 719 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms