RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 MARCH2Q9P0N8 246 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 PCOLCE2Q9UKZ9 415 aa15.69■□□□□ 0.1
ATG4B-209ENST00000425239 MUC22E2RYF6 1773 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-209ENST00000425239 GABBR2O75899 941 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 KIF20AO95235 890 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 ZNF883P0CG24 379 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 GNSP15586 552 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 HOXD9P28356 352 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-209ENST00000425239 HLA-FP30511 346 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 OXTRP30559 389 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 CAMK2GQ13555 558 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-209ENST00000425239 STARD3Q14849 445 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 EIF4HQ15056 248 aaKnown RBP15.68■□□□□ 0.1
ATG4B-209ENST00000425239 DCAF12L1Q5VU92 463 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 CCNI2Q6ZMN8 369 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-209ENST00000425239 ANKS1BQ7Z6G8 1248 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 ZC3H3Q8IXZ2 948 aaKnown RBP15.68■□□□□ 0.1
ATG4B-209ENST00000425239 FBXL13Q8NEE6 735 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 EEF2KMTQ96G04 330 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 MMRN2Q9H8L6 949 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 KIAA1522Q9P206 1035 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-209ENST00000425239 COQ4Q9Y3A0 265 aa15.68■□□□□ 0.1
ATG4B-209ENST00000425239 ADAMTS20P59510 1910 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 SLC12A8A0AV02 714 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 TIMM44O43615 452 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 ZBED1O96006 694 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 TRIM21P19474 475 aaKnown RBP15.67■□□□□ 0.1
ATG4B-209ENST00000425239 SYKP43405 635 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 TKTL1P51854 596 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 PDE4CQ08493 712 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 PTPRNQ16849 979 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 EDRF1Q3B7T1 1238 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 PKDCCQ504Y2 493 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 KRBA2Q6ZNG9 492 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 ADIPOR2Q86V24 386 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 ARHGAP18Q8N392 663 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 ZCCHC9Q8N567 271 aaKnown RBP15.67■□□□□ 0.1
ATG4B-209ENST00000425239 TTC39CQ8N584 583 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 UBR7Q8N806 425 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 PRCCQ92733 491 aaPredicted RBP15.67■□□□□ 0.1
ATG4B-209ENST00000425239 PLD4Q96BZ4 506 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 NUP58Q9BVL2 599 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 ULBP1Q9BZM6 244 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 GOLPH3LQ9H4A5 285 aa15.67■□□□□ 0.1
ATG4B-209ENST00000425239 CABIN1Q9Y6J0 2220 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 BCAT2O15382 392 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-209ENST00000425239 KRT13P13646 458 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 HLA-EP13747 358 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 RPL13P26373 211 aaKnown RBP15.66■□□□□ 0.1
ATG4B-209ENST00000425239 ACSL1P33121 698 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 SCAPQ12770 1279 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 COL9A2Q14055 689 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-209ENST00000425239 HLA-BQ31612 363 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 CBWD6Q4V339 395 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 CBWD3Q5JTY5 395 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 CBWD5Q5RIA9 395 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 FMNL3Q8IVF7 1028 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.66■□□□□ 0.1
ATG4B-209ENST00000425239 DDI1Q8WTU0 396 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 UCMAQ8WVF2 138 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 LMLNQ96KR4 655 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 ORAI3Q9BRQ5 295 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 GAREM1Q9H706 876 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 EIF2B4Q9UI10 523 aaKnown RBP15.66■□□□□ 0.1
ATG4B-209ENST00000425239 FNDC3AQ9Y2H6 1198 aaKnown RBP15.66■□□□□ 0.1
ATG4B-209ENST00000425239 GPSM3Q9Y4H4 160 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 BPTFQ12830 3046 aa15.66■□□□□ 0.1
ATG4B-209ENST00000425239 YJEFN3A6XGL0 299 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 C10orf142B7Z368 130 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 E7ENQ6 273 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 XPO1O14980 1071 aaKnown RBP15.65■□□□□ 0.1
ATG4B-209ENST00000425239 EPHX1P07099 455 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 RDXP35241 583 aaKnown RBP15.65■□□□□ 0.1
ATG4B-209ENST00000425239 MPPE1Q53F39 396 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 BSPRYQ5W0U4 402 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 SMYD4Q8IYR2 804 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-209ENST00000425239 SCML4Q8N228 414 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 SPRYD3Q8NCJ5 442 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 OR2T3Q8NH03 318 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 SPATA32Q96LK8 384 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 CIPCQ9C0C6 399 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 PCED1AQ9H1Q7 454 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 C6orf106Q9H6K1 298 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-209ENST00000425239 OSGEPQ9NPF4 335 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 TM7SF3Q9NS93 570 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 SFMBT1Q9UHJ3 866 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 TSPAN16Q9UKR8 245 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 LHX6Q9UPM6 363 aa15.65■□□□□ 0.1
ATG4B-209ENST00000425239 HBS1LQ9Y450 684 aaKnown RBP15.65■□□□□ 0.1
ATG4B-209ENST00000425239 FASNP49327 2511 aaKnown RBP15.65■□□□□ 0.1
ATG4B-209ENST00000425239 IGSF10Q6WRI0 2623 aa15.64■□□□□ 0.1
ATG4B-209ENST00000425239 A0A1W2PQ27 194 aa15.64■□□□□ 0.09
ATG4B-209ENST00000425239 A0A1W2PQ64 194 aa15.64■□□□□ 0.09
ATG4B-209ENST00000425239 MEI4A8MW99 385 aa15.64■□□□□ 0.09
ATG4B-209ENST00000425239 SYNCRIPO60506 623 aaKnown RBP15.64■□□□□ 0.09
ATG4B-209ENST00000425239 TSPAN3O60637 253 aa15.64■□□□□ 0.09
ATG4B-209ENST00000425239 CYBBP04839 570 aa15.64■□□□□ 0.09
ATG4B-209ENST00000425239 CSNK1EP49674 416 aaKnown RBP15.64■□□□□ 0.09
ATG4B-209ENST00000425239 MXI1P50539 228 aa15.64■□□□□ 0.09
ATG4B-209ENST00000425239 SGSHP51688 502 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms