RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MARCH4Q9P2E8 410 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 HECAQ9UBI9 543 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 ZMAT5Q9UDW3 170 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 SCAF8Q9UPN6 1271 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 TRAF3IP3Q9Y228 551 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 KLHL20Q9Y2M5 609 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 MTO1Q9Y2Z2 717 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 CAB39Q9Y376 341 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 PSAT1Q9Y617 370 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 NUMBLQ9Y6R0 609 aa3.95□□□□□ -1.78
SF3B1-205ENST00000424674 SPAG9O60271 1321 aaKnown RBP3.95□□□□□ -1.78
SF3B1-205ENST00000424674 RNF103-CHMP3A0A140T963 221 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 ARHGAP10A1A4S6 786 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 TRIM43BA6NCK2 446 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 NPIPB8E9PQR5 432 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 SGK1O00141 431 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 RNF103O00237 685 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 IKBKBO14920 756 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 KINO60870 393 aaKnown RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 PHF2O75151 1096 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 NDST3O95803 873 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 GLP2RO95838 553 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 F9P00740 461 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 DLDP09622 509 aaKnown RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 ARF4P18085 180 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 APEX1P27695 318 aaKnown RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 GABRB3P28472 473 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 STIP1P31948 543 aaKnown RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 MSX2P35548 267 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 PGM1P36871 562 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 MATR3P43243 847 aaKnown RBP eCLIP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 ASMTP46597 345 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 CAPZA2P47755 286 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 CARSP49589 748 aaKnown RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 RGS3P49796 1198 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 SLC12A3P55017 1021 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 HDAC4P56524 1084 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 SESN2P58004 480 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 STARD6P59095 220 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 CDK17Q00537 523 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 SLC6A3Q01959 620 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 PTH1RQ03431 593 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 KLF10Q13118 480 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 ADRM1Q16186 407 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 TRIM71Q2Q1W2 868 aaKnown RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 C3orf38Q5JPI3 329 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 KRBOX4Q5JUW0 171 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 ZBTB41Q5SVQ8 909 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 CCDC183Q5T5S1 534 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 ERMARDQ5T6L9 678 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 WDR93Q6P2C0 686 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 INO80CQ6PI98 192 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 ANGPTL8Q6UXH0 198 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 IKBIPQ70UQ0 350 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 H1FNTQ75WM6 255 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 LPCAT2Q7L5N7 544 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 RAB11FIP2Q7L804 512 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 KRT73Q86Y46 540 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 WDR63Q8IWG1 891 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 MAML2Q8IZL2 1156 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 GLIS1Q8NBF1 620 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 OR6B3Q8NGW1 331 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 NFKBIDQ8NI38 313 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 SPATA20Q8TB22 786 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 SMCR8Q8TEV9 937 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 SCFD2Q8WU76 684 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 RSC1A1Q92681 617 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 TRIM43Q96BQ3 446 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 RMDN1Q96DB5 314 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 ZNF503Q96F45 646 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 PGAP3Q96FM1 320 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 SIPA1Q96FS4 1042 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 LRRC46Q96FV0 321 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 CCDC114Q96M63 670 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 DACH2Q96NX9 599 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 TRAPPC9Q96Q05 1148 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 TEX12Q9BXU0 123 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 NELFAQ9H3P2 528 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 NDST4Q9H3R1 872 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 WDCPQ9H6R7 721 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 C17orf75Q9HAS0 396 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 BRF2Q9HAW0 419 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 A1CFQ9NQ94 594 aaKnown RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 ARHGEF3Q9NR81 526 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 STK32BQ9NY57 414 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 SELENONQ9NZV5 590 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 AKAP7Q9P0M2 348 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-205ENST00000424674 ZNF212Q9UDV6 495 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 CPA4Q9UI42 421 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 DERAQ9Y315 318 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 HS3ST4Q9Y661 456 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 PIAS3Q9Y6X2 628 aa3.94□□□□□ -1.78
SF3B1-205ENST00000424674 EIF4G1Q04637 1599 aaKnown RBP3.93□□□□□ -1.78
SF3B1-205ENST00000424674 PRSS38A1L453 326 aa3.93□□□□□ -1.78
SF3B1-205ENST00000424674 RGSL1A5PLK6 1076 aa3.93□□□□□ -1.78
SF3B1-205ENST00000424674 M0QX08 132 aa3.93□□□□□ -1.78
SF3B1-205ENST00000424674 PSMD14O00487 310 aa3.93□□□□□ -1.78
SF3B1-205ENST00000424674 CCP110O43303 1012 aa3.93□□□□□ -1.78
SF3B1-205ENST00000424674 RIPK2O43353 540 aa3.93□□□□□ -1.78
SF3B1-205ENST00000424674 ADAM20O43506 726 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms