RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 KCNK16Q96T55 309 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 RTP3Q9BQQ7 232 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 RNF208Q9H0X6 261 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 CCDC134Q9H6E4 229 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 PPCSQ9HAB8 311 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 DMAP1Q9NPF5 467 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-202ENST00000424011 OGDHLQ9ULD0 1010 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 I3L4J1 428 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 CCL5P13501 91 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 CDK7P50613 346 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 C1QTNF8P60827 252 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 BASP1P80723 227 aaKnown RBP17.12■□□□□ 0.33
CMTM3-202ENST00000424011 PDIA2Q13087 525 aaKnown RBP17.12■□□□□ 0.33
CMTM3-202ENST00000424011 NOMO2Q5JPE7 1267 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 CD300LGQ6UXG3 332 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 CAPN12Q6ZSI9 719 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 LRRC34Q8IZ02 419 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 RIBC1Q8N443 379 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-202ENST00000424011 ZMIZ2Q8NF64 920 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 NDRG1Q92597 394 aaKnown RBP17.12■□□□□ 0.33
CMTM3-202ENST00000424011 KDM4CQ9H3R0 1056 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 MTMR10Q9NXD2 777 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 BAIAP2L1Q9UHR4 511 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 CORO1CQ9ULV4 474 aaPredicted RBP17.12■□□□□ 0.33
CMTM3-202ENST00000424011 PCDHB8Q9UN66 801 aa17.12■□□□□ 0.33
CMTM3-202ENST00000424011 FRMPD3Q5JV73 1810 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 H3BRJ5 948 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 KCNN4O15554 427 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 MPP2Q14168 576 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 PDCD2Q16342 344 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-202ENST00000424011 SLC5A9Q2M3M2 681 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 EFHC2Q5JST6 749 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 CACNA2D3Q8IZS8 1091 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 PDIK1LQ8N165 341 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 SCML4Q8N228 414 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 DNAJC5GQ8N7S2 189 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 FRMD8Q9BZ67 464 aaPredicted RBP17.11■□□□□ 0.33
CMTM3-202ENST00000424011 USP29Q9HBJ7 922 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 KCNK9Q9NPC2 374 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 IRAK4Q9NWZ3 460 aa17.11■□□□□ 0.33
CMTM3-202ENST00000424011 EXOC1LA0A1B0GW35 172 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 TCRBV7S3A2A0A539 114 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 HHLA1C9JL84 531 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 F9P00740 461 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 LTFP02788 710 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 BRAFP15056 766 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 SELPP16109 830 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 BFSP2Q13515 415 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 RIPK1Q13546 671 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 MBTPS1Q14703 1052 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 GKAP1Q5VSY0 366 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-202ENST00000424011 LRRC8DQ7L1W4 858 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 RTN4RL1Q86UN2 441 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-202ENST00000424011 ANKRD42Q8N9B4 389 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 HASPINQ8TF76 798 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 CCT6BQ92526 530 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 PGAP3Q96FM1 320 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-202ENST00000424011 MLXIPLQ9NP71 852 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 XPO7Q9UIA9 1087 aaKnown RBP17.1■□□□□ 0.33
CMTM3-202ENST00000424011 YJEFN3A6XGL0 299 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 E7ENQ6 273 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 TMEM189-UBE2V1I3L0A0 370 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 NRP1O14786 923 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 LIN7AO14910 233 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-202ENST00000424011 CHADO15335 359 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 ZNF189O75820 626 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-202ENST00000424011 USP17L7P0C7H9 530 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 PHBP35232 272 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 YWHAHQ04917 246 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-202ENST00000424011 RNASELQ05823 741 aaKnown RBP17.1■□□□□ 0.33
CMTM3-202ENST00000424011 NME3Q13232 169 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 TMED2Q15363 201 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 MSS51Q4VC12 460 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 SLC45A4Q5BKX6 768 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 FNBP1LQ5T0N5 605 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 FAM182AQ5T1J6 154 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 SYPL2Q5VXT5 272 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 C4orf50Q6ZRC1 276 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 ANKMY2Q8IV38 441 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 SRRM1Q8IYB3 904 aaKnown RBP17.1■□□□□ 0.33
CMTM3-202ENST00000424011 SLC7A14Q8TBB6 771 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 MAML1Q92585 1016 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 NTAN1Q96AB6 310 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 PKMYT1Q99640 499 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 FERMT1Q9BQL6 677 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 VPS37BQ9H9H4 285 aa17.1■□□□□ 0.33
CMTM3-202ENST00000424011 HACD1B0YJ81 288 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 ANP32DO95626 131 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 NCAM1P13591 858 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 RBL1P28749 1068 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 DSC1Q08554 894 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 ARL13BQ3SXY8 428 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 OTUD1Q5VV17 481 aaPredicted RBP17.09■□□□□ 0.33
CMTM3-202ENST00000424011 PYROXD1Q8WU10 500 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 FAM193BQ96PV7 902 aaPredicted RBP17.09■□□□□ 0.33
CMTM3-202ENST00000424011 KLC2Q9H0B6 622 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 TMEM161AQ9NX61 479 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 E7ESA3 106 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 POC1B-GALNT4F8VUJ3 575 aa17.09■□□□□ 0.33
CMTM3-202ENST00000424011 AHCYL1O43865 530 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms