RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SERHL2Q9H4I8 314 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 SERHLQ9NQF3 203 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 MAN1C1Q9NR34 630 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 RBMX2Q9Y388 322 aaKnown RBP12.34□□□□□ -0.43
UBR4-205ENST00000417040 PCDHA3Q9Y5H8 950 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 SPATA31A3Q5VYP0 1347 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 SNPHO15079 494 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 GARTP22102 1010 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 ADSLP30566 484 aaPredicted RBP12.34□□□□□ -0.43
UBR4-205ENST00000417040 GPC1P35052 558 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 HARS2P49590 506 aaKnown RBP12.34□□□□□ -0.43
UBR4-205ENST00000417040 CNTN1Q12860 1018 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 DGUOKQ16854 277 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 ATG14Q6ZNE5 492 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 CARNMT1Q8N4J0 409 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 CCDC126Q96EE4 140 aa12.34□□□□□ -0.43
UBR4-205ENST00000417040 ABCA8O94911 1581 aa12.33□□□□□ -0.43
UBR4-205ENST00000417040 TISP43B9A030 160 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 PRRG1O14668 218 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 USP12O75317 370 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 AMPD1P23109 780 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 DSG3P32926 999 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 GRTP1Q5TC63 336 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 RORBQ92753 470 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 MED8Q96G25 268 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 PCDH9Q9HC56 1237 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 MRGBPQ9NV56 204 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 NPM3O75607 178 aaKnown RBP12.33□□□□□ -0.44
UBR4-205ENST00000417040 CNTFP26441 200 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 HALP42357 657 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 CLCN3P51790 818 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 ZNF34Q8IZ26 560 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 TBC1D19Q8N5T2 526 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 ADAM32Q8TC27 787 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 TMC2Q8TDI7 906 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 ATG4CQ96DT6 458 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 ME2P23368 584 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 CLK2P49760 499 aaKnown RBP12.33□□□□□ -0.44
UBR4-205ENST00000417040 HIST2H2ACQ16777 129 aaPredicted RBP12.33□□□□□ -0.44
UBR4-205ENST00000417040 HIST2H2AA3Q6FI13 130 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 NANOGNBQ7Z5D8 188 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 STKLD1Q8NE28 680 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 ENKURQ8TC29 256 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 EDEM1Q92611 657 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 NSMCE2Q96MF7 247 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 KATNAL1Q9BW62 490 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 FRMD8Q9BZ67 464 aaPredicted RBP12.33□□□□□ -0.44
UBR4-205ENST00000417040 ATAD3AQ9NVI7 634 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 COPG2Q9UBF2 871 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 PCDHB8Q9UN66 801 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 GLP2RO95838 553 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 GH1P01241 217 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 MGAT5Q09328 741 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 NTRK3Q16288 839 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 RNF19BQ6ZMZ0 732 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
UBR4-205ENST00000417040 CKAP2Q8WWK9 683 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 DMAP1Q9NPF5 467 aaPredicted RBP12.33□□□□□ -0.44
UBR4-205ENST00000417040 XPNPEP3Q9NQH7 507 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 SH3BP1Q9Y3L3 701 aa12.33□□□□□ -0.44
UBR4-205ENST00000417040 A0A096LPK6 155 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 SNX3O60493 162 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 MICAL2O94851 1124 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 DRD4P21917 467 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 TAF6P49848 677 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 CYP4F2P78329 520 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 DLG4P78352 724 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 CYP4F3Q08477 520 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 IER5Q5VY09 327 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 LLGL2Q6P1M3 1020 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 TTC7BQ86TV6 843 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 FBXO30Q8TB52 745 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 CGRRF1Q99675 332 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 GORASP1Q9BQQ3 440 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 ABCB10Q9NRK6 738 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 ZNF624Q9P2J8 865 aaPredicted RBP12.32□□□□□ -0.44
UBR4-205ENST00000417040 NFKBIL1Q9UBC1 381 aaPredicted RBP12.32□□□□□ -0.44
UBR4-205ENST00000417040 ZBTB7AO95365 584 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 ZBTB11O95625 1053 aaPredicted RBP12.32□□□□□ -0.44
UBR4-205ENST00000417040 STAG3L1P0CL83 205 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 VDRP11473 427 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 FCGR1AP12314 374 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 ALDH9A1P49189 494 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 ST8SIA6P61647 398 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 CCDC153Q494R4 210 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 CBWD6Q4V339 395 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 CBWD3Q5JTY5 395 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 CBWD5Q5RIA9 395 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 MYO1HQ8N1T3 1032 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 C2orf69Q8N8R5 385 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 LINC00116Q8NCU8 138 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 BPIFB6Q8NFQ5 453 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 TMEM176AQ96HP8 235 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 ANKEF1Q9NU02 776 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 LSM7Q9UK45 103 aaKnown RBP12.32□□□□□ -0.44
UBR4-205ENST00000417040 TP73O15350 636 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 LDLRP01130 860 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 TSPAN8P19075 237 aa12.32□□□□□ -0.44
UBR4-205ENST00000417040 SLC41A1Q8IVJ1 513 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms