RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 HPCAL4Q9UM19 191 aa6.89□□□□□ -1.31
HDAC8-211ENST00000415409 AP4E1Q9UPM8 1137 aa6.89□□□□□ -1.31
HDAC8-211ENST00000415409 NAALADL1Q9UQQ1 740 aa6.89□□□□□ -1.31
HDAC8-211ENST00000415409 USP3Q9Y6I4 520 aa6.89□□□□□ -1.31
HDAC8-211ENST00000415409 SYNJ2BP-COX16A0A087WUM0 186 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 CFAP69A5D8W1 941 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 TRIM43BA6NCK2 446 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 NT5C1B-RDH14C9J2C7 533 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 H7C0C1 242 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 SGK1O00141 431 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 OPA1O60313 960 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ZNF189O75820 626 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 DGKIO75912 1065 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 BAIAP3O94812 1187 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 RTN3O95197 1032 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 FAM153BP0C7A2 387 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 LAG3P18627 525 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 TFE3P19532 575 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ECHS1P30084 290 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 STIP1P31948 543 aaKnown RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ADRA1BP35368 520 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ATP5OP48047 213 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 NR2C2P49116 596 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ZNF135P52742 658 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 RABGGTBP53611 331 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 EIF3EP60228 445 aaKnown RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 YWHAGP61981 247 aaKnown RBP eCLIP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 RPL10AP62906 217 aaKnown RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 FAM193AP78312 1265 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ROR1Q01973 937 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 IFRD2Q12894 506 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 GPR17Q13304 367 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 SLMAPQ14BN4 828 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 NOMO1Q15155 1222 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 NR6A1Q15406 480 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 TRIP13Q15645 432 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 OASLQ15646 514 aaKnown RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 CA9Q16790 459 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 FAM153CQ494X1 144 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ZC3H12AQ5D1E8 599 aaKnown RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 PPP6R3Q5H9R7 873 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 SPDYCQ5MJ68 293 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 SYPL2Q5VXT5 272 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 BSPRYQ5W0U4 402 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 KIAA1841Q6NSI8 718 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 DARS2Q6PI48 645 aaKnown RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 C1orf228Q6PIY5 440 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ZDHHC24Q6UX98 284 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 HFE2Q6ZVN8 426 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 PDZD4Q76G19 769 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 MON1AQ86VX9 555 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 CDKL3Q8IVW4 592 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 NUP93Q8N1F7 819 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 CCDC185Q8N715 623 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 SLC35B2Q8TB61 432 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 SPPL2BQ8TCT7 592 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 RNF139Q8WU17 664 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 EDEM1Q92611 657 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ART4Q93070 314 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 RNF34Q969K3 372 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 NTAN1Q96AB6 310 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 TRIM43Q96BQ3 446 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 FAF2Q96CS3 445 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 PGAP3Q96FM1 320 aaPredicted RBP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 FAM118BQ9BPY3 351 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 FOXP3Q9BZS1 431 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 WDCPQ9H6R7 721 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 PCDH9Q9HC56 1237 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 MED4Q9NPJ6 270 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ABCC13Q9NSE7 274 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ZDHHC18Q9NUE0 388 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 TMEM30AQ9NV96 361 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 COMMD8Q9NX08 183 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 DDIT4Q9NX09 232 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.88□□□□□ -1.31
HDAC8-211ENST00000415409 GRHL1Q9NZI5 618 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 COX16Q9P0S2 106 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 PRKAG2Q9UGJ0 569 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 FAM153AQ9UHL3 310 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 FBXW11Q9UKB1 542 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 BACE2Q9Y5Z0 518 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 ALPK3Q96L96 1907 aa6.88□□□□□ -1.31
HDAC8-211ENST00000415409 RALGAPA2Q2PPJ7 1873 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 GOLGA6L10A6NI86 522 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 TNFRSF10BO14763 440 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 TBC1D4O60343 1298 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 PPFIA2O75334 1257 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 IFNB1P01574 187 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 FYNP06241 537 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 RBP3P10745 1247 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 CSF2RAP15509 400 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 IL4RP24394 825 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 KLRC2P26717 231 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 ACTN2P35609 894 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 PBX3P40426 434 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 TUFMP49411 452 aaKnown RBP6.87□□□□□ -1.31
HDAC8-211ENST00000415409 CXCR3P49682 368 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 ITGA8P53708 1063 aa6.87□□□□□ -1.31
HDAC8-211ENST00000415409 ATXN1P54253 815 aaKnown RBP6.87□□□□□ -1.31
HDAC8-211ENST00000415409 RAB15P59190 212 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms