RNA–Protein interactions for RNA: ENST00000414461.6

RBFOX2-207, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-207ENST00000414461 LAG3P18627 525 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 COL9A1P20849 921 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 CA8P35219 290 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 BMPR1AP36894 532 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 ACADVLP49748 655 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 LIG4P49917 911 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 SCNN1GP51170 649 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 AFF1P51825 1210 aaKnown RBP8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 SF3A3Q12874 501 aaKnown RBP eCLIP8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 USP4Q13107 963 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 DNAJC3Q13217 504 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 SKIV2LQ15477 1246 aaKnown RBP8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 DCAF4L1Q3SXM0 396 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 DNAL1Q4LDG9 190 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 ZC2HC1CQ53FD0 456 aaPredicted RBP8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 ZNF449Q6P9G9 518 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 CCDC25Q86WR0 208 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 MYLK4Q86YV6 388 aaPredicted RBP8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 GLYCTKQ8IVS8 523 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 ZBTB8BQ8NAP8 495 aaPredicted RBP8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 COLGALT1Q8NBJ5 622 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 CCDC110Q8TBZ0 833 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 ADAMTS19Q8TE59 1207 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 SLC35C1Q96A29 364 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 ZBTB45Q96K62 511 aaPredicted RBP8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 ZFP42Q96MM3 310 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 ZNF558Q96NG5 402 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 FAM193BQ96PV7 902 aaPredicted RBP8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 ACO2Q99798 780 aaKnown RBP8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 C11orf84Q9BUA3 381 aaPredicted RBP8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 CDT1Q9H211 546 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 C1orf21Q9H246 121 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 KRT82Q9NSB4 513 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 TBC1D13Q9NVG8 400 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 GCNT4Q9P109 453 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 UVRAGQ9P2Y5 699 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 PCDHB12Q9Y5F1 795 aa8.34□□□□□ -1.07
RBFOX2-207ENST00000414461 ZMYM2Q9UBW7 1377 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 ARHGAP10A1A4S6 786 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 ARL5CA6NH57 179 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 CIB2O75838 187 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 RECQL4O94761 1208 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 CBX6O95503 412 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 LINC00271P0C7V0 271 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 ESRRAP11474 423 aaPredicted RBP8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 ANPEPP15144 967 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 ATF2P15336 505 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 GAP43P17677 238 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 IVDP26440 423 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 PSMC2P35998 433 aaKnown RBP8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 MRPS5P82675 430 aaKnown RBP8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 PLCB3Q01970 1234 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 MED21Q13503 144 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 SPIDRQ14159 915 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 SIX1Q15475 284 aaPredicted RBP8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 SEZ6Q53EL9 994 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 BORAQ6PGQ7 559 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 MPZL3Q6UWV2 235 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 DSTYKQ6XUX3 929 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 B3GNT6Q6ZMB0 384 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 FAM47EQ6ZV65 393 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 CENPUQ71F23 418 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 MRPL10Q7Z7H8 261 aaKnown RBP8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 MTDHQ86UE4 582 aaKnown RBP8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 SPATA24Q86W54 205 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 SMYD1Q8NB12 490 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 UHMK1Q8TAS1 419 aaKnown RBP8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 WDR60Q8WVS4 1066 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 ZNF75CPQ92670 426 aaPredicted RBP8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 CLP1Q92989 425 aaKnown RBP8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 FAM81BQ96LP2 452 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 BTBD9Q96Q07 612 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 MIPEPQ99797 713 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 CWH43Q9H720 699 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 NDE1Q9NXR1 346 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 NINJ2Q9NZG7 142 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 ASIC3Q9UHC3 531 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 TBX20Q9UMR3 447 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 SORCS3Q9UPU3 1222 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 TNFSF13BQ9Y275 285 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 SH3GLB1Q9Y371 365 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 RALGAPA2Q2PPJ7 1873 aa8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 PRRC2BQ5JSZ5 2229 aaKnown RBP8.33□□□□□ -1.08
RBFOX2-207ENST00000414461 TMEM221A6NGB7 291 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 EIF4E1BA6NMX2 242 aaKnown RBP8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 H3BNC9 293 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 SMAPO00193 183 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 GRM6O15303 877 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 TP73O15350 636 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 EIF3DO15371 548 aaKnown RBP eCLIP8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 P4HA2O15460 535 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 PEX1O43933 1283 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 LPXNO60711 386 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 KRT36O76013 467 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 ITGB1P05556 798 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 PGM1P36871 562 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 ACTR3P61158 418 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 PHEXP78562 749 aa8.32□□□□□ -1.08
RBFOX2-207ENST00000414461 KRT17Q04695 432 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms