RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 MCRS1Q96EZ8 462 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 CRAMP1Q96RY5 1269 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 ISCA1Q9BUE6 129 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 SEMA4CQ9C0C4 833 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 MLXIPQ9HAP2 919 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 FLRT1Q9NZU1 646 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 DAPP1Q9UN19 280 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 RIPOR2Q9Y4F9 1068 aa4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 SIRT4Q9Y6E7 314 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P11-201ENST00000413899 FER1L4A9Z1Z3 1794 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 TTC34A8MYJ7 566 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 TMEM232C9JQI7 657 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 NBNO60934 754 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 PPFIA2O75334 1257 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 CYP3A4P08684 503 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 GYS1P13807 737 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 IGFBP2P18065 325 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 CST5P28325 142 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 CD38P28907 300 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 AKT1P31749 480 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 HOXD12P35452 270 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 TLE3Q04726 772 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 FOXF2Q12947 444 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 SLC14A1Q13336 389 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 CNGA3Q16281 694 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 BTBD16Q32M84 506 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 TBRG1Q3YBR2 411 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 TTC22Q5TAA0 569 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 SULT6B1Q6IMI4 303 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 JMJD6Q6NYC1 403 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 RANBP10Q6VN20 620 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 KYAT3Q6YP21 454 aaKnown RBP4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 ZNF782Q6ZMW2 699 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 SMC5Q8IY18 1101 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 SPATA5Q8NB90 893 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 SCAMP5Q8TAC9 235 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 ASB12Q8WXK4 309 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 AKAP1Q92667 903 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 TRMT61AQ96FX7 289 aaKnown RBP4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 PSMD1Q99460 953 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 GATA5Q9BWX5 397 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 MYLK2Q9H1R3 596 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 VPS16Q9H269 839 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 PTGFRNQ9P2B2 879 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 C19orf53Q9UNZ5 99 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 PCDHB7Q9Y5E2 793 aa4.35□□□□□ -1.71
HMGB1P11-201ENST00000413899 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 MBD3L5A6NJ08 208 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 SLC38A8A6NNN8 435 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 KIF28PB7ZC32 967 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 M0QYT0 321 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 IPO5O00410 1097 aaKnown RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 PRYO14603 147 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 PPP6R2O75170 966 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 FAM155BO75949 473 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 TUBB4AP04350 444 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 CYP2D6P10635 497 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 CERS1P27544 350 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 NDUFS1P28331 727 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 THBS4P35443 961 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 ZNF84P51523 738 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 FOXL2P58012 376 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 RPL15P61313 204 aaKnown RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 RBM6P78332 1123 aaKnown RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 SF3A3Q12874 501 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 GAB1Q13480 694 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 PRKG1Q13976 671 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 DHX8Q14562 1220 aaKnown RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 TMEM119Q4V9L6 283 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 INO80DQ53TQ3 878 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 AWAT1Q58HT5 328 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 ANO1Q5XXA6 986 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 WDR93Q6P2C0 686 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 SYCE2Q6PIF2 218 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 ZNF66Q6ZN08 573 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 CCDC117Q8IWD4 279 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 GALNT15Q8N3T1 639 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 CCT6BQ92526 530 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 SDCCAG3Q96C92 435 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 REXO5Q96IC2 774 aaKnown RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 ZNF845Q96IR2 970 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 NPAS1Q99742 590 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 SENP7Q9BQF6 1050 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 PAGR1Q9BTK6 254 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 MECRQ9BV79 373 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 ELOVL1Q9BW60 279 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 SORBS1Q9BX66 1292 aaKnown RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 LIN7CQ9NUP9 197 aaKnown RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 NDUFAF4Q9P032 175 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 SRP68Q9UHB9 627 aaKnown RBP4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 VPS4AQ9UN37 437 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 SPATA31A5Q5VU36 1347 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 SPATA31A7Q8IWB4 1347 aa4.34□□□□□ -1.71
HMGB1P11-201ENST00000413899 CYP3A7-CYP3A51PA0A087WV96 503 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 C16orf96A6NNT2 1141 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 PIP5K1CO60331 668 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 SGPL1O95470 568 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 CYP3A7P24462 503 aa4.33□□□□□ -1.72
HMGB1P11-201ENST00000413899 SLC8A1P32418 973 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms