RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FRMD4BQ9Y2L6 1034 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 ADAMTS20P59510 1910 aa12.74□□□□□ -0.37
LIMS2-210ENST00000413578 CKAP5Q14008 2032 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 TIMM44O43615 452 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 EPHX1P07099 455 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 HMBSP08397 361 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 PDIA4P13667 645 aaKnown RBP12.73□□□□□ -0.37
LIMS2-210ENST00000413578 HLA-EP13747 358 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 CD58P19256 250 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 HLA-FP30511 346 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 ACSL1P33121 698 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 ME1P48163 572 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 CSNK1EP49674 416 aaKnown RBP12.73□□□□□ -0.37
LIMS2-210ENST00000413578 AFF3P51826 1226 aaKnown RBP12.73□□□□□ -0.37
LIMS2-210ENST00000413578 PDE4CQ08493 712 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 PTPRNQ16849 979 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 CEP135Q66GS9 1140 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 ARHGAP17Q68EM7 881 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 SERPINA13PQ6UXR4 307 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 INTS8Q75QN2 995 aaKnown RBP12.73□□□□□ -0.37
LIMS2-210ENST00000413578 KIAA0907Q7Z7F0 614 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-210ENST00000413578 PIGZQ86VD9 579 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 CACUL1Q86Y37 369 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 CEP57L1Q8IYX8 460 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.73□□□□□ -0.37
LIMS2-210ENST00000413578 SLC4A11Q8NBS3 891 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 PLD4Q96BZ4 506 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 BBC3Q96PG8 261 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-210ENST00000413578 CDC6Q99741 560 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 IMPG2Q9BZV3 1241 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 CIPCQ9C0C6 399 aa12.73□□□□□ -0.37
LIMS2-210ENST00000413578 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.73□□□□□ -0.37
LIMS2-210ENST00000413578 CABIN1Q9Y6J0 2220 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 SLC12A8A0AV02 714 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 C10orf142B7Z368 130 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 PAPSS1O43252 624 aaPredicted RBP12.72□□□□□ -0.37
LIMS2-210ENST00000413578 F13A1P00488 732 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 CYBBP04839 570 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 MYL1P05976 194 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 ACADMP11310 421 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 GRIA4P48058 902 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 RAD23BP54727 409 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 YWHAGP61981 247 aaKnown RBP eCLIP12.72□□□□□ -0.37
LIMS2-210ENST00000413578 SMAD1Q15797 465 aaKnown RBP12.72□□□□□ -0.37
LIMS2-210ENST00000413578 ZCWPW2Q504Y3 356 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 ATL3Q6DD88 541 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 ADIPOR2Q86V24 386 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 MARCH9Q86YJ5 346 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 ZC3H3Q8IXZ2 948 aaKnown RBP12.72□□□□□ -0.37
LIMS2-210ENST00000413578 ARHGAP18Q8N392 663 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 RHBDD1Q8TEB9 315 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 SEMA4DQ92854 862 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 LHX5Q9H2C1 402 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 TMEM8AQ9HCN3 771 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 TM9SF3Q9HD45 589 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 RCOR1Q9UKL0 485 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 SNX11Q9Y5W9 270 aa12.72□□□□□ -0.37
LIMS2-210ENST00000413578 MUC22E2RYF6 1773 aaPredicted RBP12.71□□□□□ -0.37
LIMS2-210ENST00000413578 GCN1Q92616 2671 aaKnown RBP12.71□□□□□ -0.37
LIMS2-210ENST00000413578 URB1O60287 2271 aaKnown RBP12.71□□□□□ -0.37
LIMS2-210ENST00000413578 A0A087WV48 116 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 CALUO43852 315 aaPredicted RBP12.71□□□□□ -0.37
LIMS2-210ENST00000413578 PCDHGA12O60330 932 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 TSPAN3O60637 253 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 KIF20AO95235 890 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 ZBED1O96006 694 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 ZSCAN22P10073 491 aaPredicted RBP12.71□□□□□ -0.37
LIMS2-210ENST00000413578 NR2F2P24468 414 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 ZBTB16Q05516 673 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 MPPE1Q53F39 396 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 ZNF394Q53GI3 561 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 KCNT1Q5JUK3 1230 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 FOXD4L5Q5VV16 416 aaPredicted RBP12.71□□□□□ -0.37
LIMS2-210ENST00000413578 FAM124AQ86V42 546 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 ANKRD52Q8NB46 1076 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 WFIKKN2Q8TEU8 576 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 DDI1Q8WTU0 396 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 HNRNPLLQ8WVV9 542 aaKnown RBP12.71□□□□□ -0.37
LIMS2-210ENST00000413578 FOXD4L4Q8WXT5 416 aaPredicted RBP12.71□□□□□ -0.37
LIMS2-210ENST00000413578 IGSF8Q969P0 613 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 TMEM176AQ96HP8 235 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 HEXIM2Q96MH2 286 aaKnown RBP12.71□□□□□ -0.37
LIMS2-210ENST00000413578 ARID3AQ99856 593 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 FBRSQ9HAH7 460 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 CISHQ9NSE2 258 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 STRIP2Q9ULQ0 834 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 HPSEQ9Y251 543 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 ANKRD6Q9Y2G4 727 aa12.71□□□□□ -0.37
LIMS2-210ENST00000413578 ASXL3Q9C0F0 2248 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 HELZ2Q9BYK8 2649 aaKnown RBP12.7□□□□□ -0.38
LIMS2-210ENST00000413578 TRABD2BA6NFA1 517 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 TULP2O00295 520 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 TNFSF14O43557 240 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 RHOBTB3O94955 611 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 LATS1O95835 1130 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 GTF2H1P32780 548 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 CTSKP43235 329 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 TKTL1P51854 596 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 ZNF445P59923 1031 aa12.7□□□□□ -0.38
LIMS2-210ENST00000413578 RPS14P62263 151 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms