RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 GON4LQ3T8J9 2241 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 DLEC1Q9Y238 1755 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 CLUHO75153 1309 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 TLR5O60602 858 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 MT-ND3P03897 115 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 TKTP29401 623 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 GGCXP38435 758 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 TUBP50607 506 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 GEMP55040 296 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 PLEKHA7Q6IQ23 1121 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 AGMOQ6ZNB7 445 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 RAPH1Q70E73 1250 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 TRMT10CQ7L0Y3 403 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 ACSF2Q96CM8 615 aaPredicted RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 PCED1BQ96HM7 432 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 ATP6V1G3Q96LB4 118 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 RAB3IPQ96QF0 476 aaPredicted RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 ERP44Q9BS26 406 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 TUBB6Q9BUF5 446 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 VPS28Q9UK41 221 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 RAB21Q9UL25 225 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 OGDHLQ9ULD0 1010 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 PIRO00625 290 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 TTI1O43156 1089 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 OTUD4Q01804 1114 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 PDIA2Q13087 525 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 KCTD16Q68DU8 428 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 CARNMT1Q8N4J0 409 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 PPHLN1Q8NEY8 458 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 LRRC8CQ8TDW0 803 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 SENP1Q9P0U3 644 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 AAR2Q9Y312 384 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 CDK5RAP2Q96SN8 1893 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 SPAG6O75602 509 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 SLC25A52Q3SY17 297 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 PPP2R2DQ66LE6 453 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 LRRC49Q8IUZ0 686 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 SMG8Q8ND04 991 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 USP33Q8TEY7 942 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 BORCS6Q96GS4 357 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 SCYL1Q96KG9 808 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 TCF25Q9BQ70 676 aa8.79□□□□□ -1
SYNE1-211ENST00000413186 NOVA2Q9UNW9 492 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 FNDC3AQ9Y2H6 1198 aaKnown RBP8.79□□□□□ -1
SYNE1-211ENST00000413186 LTBP1Q14766 1721 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 A0A087WUV0 522 aaPredicted RBP8.78□□□□□ -1
SYNE1-211ENST00000413186 MYBPHLA2RUH7 354 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 TMEM191CA6NGB0 347 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 C9IYK1 514 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 CALCAP01258 141 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 LMNAP02545 664 aaKnown RBP8.78□□□□□ -1
SYNE1-211ENST00000413186 S100BP04271 92 aaPredicted RBP8.78□□□□□ -1
SYNE1-211ENST00000413186 SAT1P21673 171 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 SLC11A1P49279 550 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 RENBPP51606 427 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 GPM6BQ13491 265 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 ACTL9Q8TC94 416 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 KATNBL1Q9H079 304 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 COMMD8Q9NX08 183 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 NOCTQ9UK39 431 aaKnown RBP8.78□□□□□ -1
SYNE1-211ENST00000413186 MYH7BA7E2Y1 1941 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 HACD1B0YJ81 288 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 LCA5LO95447 670 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 ACSL3O95573 720 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 CYP1A1P04798 512 aaPredicted RBP8.78□□□□□ -1
SYNE1-211ENST00000413186 SLC8A1P32418 973 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 SCNN1AP37088 669 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 PCYT1AP49585 367 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 INCA1Q0VD86 236 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 TAF10Q12962 218 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 CCDC38Q502W7 563 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 DNAAF5Q86Y56 855 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 LGI2Q8N0V4 545 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 ANKRD42Q8N9B4 389 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 LEMD2Q8NC56 503 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 ADAM32Q8TC27 787 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 TMEM40Q8WWA1 233 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 SCG3Q8WXD2 468 aaKnown RBP8.78□□□□□ -1
SYNE1-211ENST00000413186 CPXM1Q96SM3 734 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 PCDHB18PQ96TA0 734 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 TLR10Q9BXR5 811 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 PFDN4Q9NQP4 134 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 GOLGA8MH3BSY2 632 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 CIB2O75838 187 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 OR4Q2P0C623 313 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 GABRR2P28476 465 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 TAF1BQ53T94 588 aaPredicted RBP8.78□□□□□ -1
SYNE1-211ENST00000413186 AGBL2Q5U5Z8 902 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 PPIL6Q8IXY8 311 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 PLEKHO2Q8TD55 490 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 AGAP3Q96P47 875 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 VAT1Q99536 393 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 MCOLN1Q9GZU1 580 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 NRDE2Q9H7Z3 1164 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 OR12D3Q9UGF7 316 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 SIX4Q9UIU6 781 aa8.78□□□□□ -1
SYNE1-211ENST00000413186 ZBTB42B2RXF5 422 aa8.77□□□□□ -1
SYNE1-211ENST00000413186 TXNDC9O14530 226 aa8.77□□□□□ -1
SYNE1-211ENST00000413186 DNAJC8O75937 253 aaPredicted RBP8.77□□□□□ -1
SYNE1-211ENST00000413186 CCDC159P0C7I6 412 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms