RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TRIM13O60858 407 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 RASA1P20936 1047 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ABRQ12979 859 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ZNF786Q8N393 782 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 TNIP2Q8NFZ5 429 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 COPS5Q92905 334 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ACAT2Q9BWD1 397 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 TNKS2Q9H2K2 1166 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 OR10H1Q9Y4A9 318 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 PCDHA11Q9Y5I1 949 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 CITO14578 2027 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 PVALEFA0A1B0GWK0 134 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 STK4Q13043 487 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 UTS2BQ765I0 119 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 FAM96AQ9H5X1 160 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ASAH2Q9NR71 780 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 DSEQ9UL01 958 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 CCDC189A1A4V9 331 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 GRXCR2A6NFK2 248 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 RAMP2O60895 175 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 MICAL2O94851 1124 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ATP5BP06576 529 aaKnown RBP8.62□□□□□ -1.03
SCN9A-203ENST00000409672 VAV1P15498 845 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ITPKBP27987 946 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 MAGEA4P43358 317 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 ZNF621Q6ZSS3 439 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 KLK6Q92876 244 aa8.62□□□□□ -1.03
SCN9A-203ENST00000409672 PSMC3IPQ9P2W1 217 aaPredicted RBP8.62□□□□□ -1.03
SCN9A-203ENST00000409672 A0A0B4J269 797 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CALCAP01258 141 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 PTPN3P26045 913 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 ZNF484Q5JVG2 852 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 NETO2Q8NC67 525 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 THAP2Q9H0W7 228 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 RSAD1Q9HA92 442 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 AKR1A1P14550 325 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 NDST1P52848 882 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 ERVK-9P63128 1117 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 ERVK-24P63145 666 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CSTF3Q12996 717 aaKnown RBP8.61□□□□□ -1.03
SCN9A-203ENST00000409672 EDRF1Q3B7T1 1238 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CCDC92Q53HC0 331 aaPredicted RBP8.61□□□□□ -1.03
SCN9A-203ENST00000409672 TCEAL5Q5H9L2 206 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CRTC3Q6UUV7 619 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 FAM129CQ86XR2 697 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CFAP52Q8N1V2 620 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CD99L2Q8TCZ2 262 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 GPAMQ9HCL2 828 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 PSMC3P17980 439 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 BCAT1P54687 386 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 FOXM1Q08050 763 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 MB21D2Q8IYB1 491 aaPredicted RBP8.61□□□□□ -1.03
SCN9A-203ENST00000409672 COLGALT1Q8NBJ5 622 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 PPP1R10Q96QC0 940 aaKnown RBP8.61□□□□□ -1.03
SCN9A-203ENST00000409672 PRKD2Q9BZL6 878 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 UBE2OQ9C0C9 1292 aaKnown RBP8.61□□□□□ -1.03
SCN9A-203ENST00000409672 RMND5AQ9H871 391 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 VPS45Q9NRW7 570 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CDY2AQ9Y6F7 541 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 PHF20L1A8MW92 1017 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 RBAK-RBAKDNI3L0D1 243 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 SCN2BO60939 215 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 ENTPD3O75355 529 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 MAT2AP31153 395 aaKnown RBP8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CCR1P32246 355 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 MAPK10P53779 464 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CASP9P55211 416 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 MYBPC1Q00872 1141 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 ARMC4Q5T2S8 1044 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 FAM228AQ86W67 206 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CATSPER2Q96P56 530 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 KANSL3Q9P2N6 904 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CASZ1Q86V15 1759 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 M0R3G1 203 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 TCEA3O75764 348 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 TARSP26639 723 aaKnown RBP8.61□□□□□ -1.03
SCN9A-203ENST00000409672 NCF4Q15080 339 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 RAP1GAP2Q684P5 730 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 ERP27Q96DN0 273 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 AVENQ9NQS1 362 aaPredicted RBP8.61□□□□□ -1.03
SCN9A-203ENST00000409672 GMEB2Q9UKD1 530 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 ENTPD4Q9Y227 616 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 LRCH1Q9Y2L9 728 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 MAP2P11137 1827 aaKnown RBP8.61□□□□□ -1.03
SCN9A-203ENST00000409672 PDXKO00764 312 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 VPS4BO75351 444 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 HDCP19113 662 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 EIF4BP23588 611 aaKnown RBP8.61□□□□□ -1.03
SCN9A-203ENST00000409672 PPP2R1BP30154 601 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 FBXO47Q5MNV8 452 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 RASGRP2Q7LDG7 609 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 GPR156Q8NFN8 814 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CBWD1Q9BRT8 395 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 RGS18Q9NS28 235 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 SEC22BO75396 215 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 IGSF6O95976 241 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 POLD2P49005 469 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 CENPCQ03188 943 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 MMRN1Q13201 1228 aa8.61□□□□□ -1.03
SCN9A-203ENST00000409672 SNX30Q5VWJ9 437 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms