RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 CISD3P0C7P0 127 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 ZDHHC11BP0C7U3 371 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 ZNF883P0CG24 379 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 MBL2P11226 248 aaPredicted RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 WARSP23381 471 aaKnown RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 ITPKBP27987 946 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 GTF2H1P32780 548 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 GNL1P36915 607 aaPredicted RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 PIK3CAP42336 1068 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 CDH8P55286 799 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 TNNC1P63316 161 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 CYP27A1Q02318 531 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 GAD2Q05329 585 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 SMAD1Q15797 465 aaKnown RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 PTPRNQ16849 979 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 HLA-BQ31612 363 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 ZNF699Q32M78 642 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 ZACNQ401N2 412 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 ZNF667Q5HYK9 610 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 C10orf76Q5T2E6 689 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 CCDC183Q5T5S1 534 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 KRT39Q6A163 491 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 DPH6Q7L8W6 267 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 TRMT11Q7Z4G4 463 aaKnown RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 ZC3H3Q8IXZ2 948 aaKnown RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 CCDC150Q8NCX0 1101 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 ANKK1Q8NFD2 765 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 OR6B3Q8NGW1 331 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 SCAMP5Q8TAC9 235 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 FOXJ1Q92949 421 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 OTUB2Q96DC9 234 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 TOE1Q96GM8 510 aaKnown RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 MRPL45Q9BRJ2 306 aaKnown RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 ZDHHC5Q9C0B5 715 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 MKRN2Q9H000 416 aaKnown RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 SNX25Q9H3E2 840 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 DPEP3Q9H4B8 488 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 PRORYQ9H606 182 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 GAREM1Q9H706 876 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 CCSER2Q9H7U1 834 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 METTL14Q9HCE5 456 aaKnown RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 TMEM8AQ9HCN3 771 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 WSB2Q9NYS7 404 aaPredicted RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 IL37Q9NZH6 218 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 USP36Q9P275 1121 aaKnown RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 TBC1D14Q9P2M4 693 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 DEC1Q9P2X7 70 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 CHORDC1Q9UHD1 332 aaPredicted RBP6.53□□□□□ -1.36
RPA3-204ENST00000406109 DACH1Q9UI36 760 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 RABGEF1Q9UJ41 708 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 RAD54BQ9Y620 910 aa6.53□□□□□ -1.36
RPA3-204ENST00000406109 DOPEY2Q9Y3R5 2298 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 A0A1B0GTW7 788 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 FAM92AA1XBS5 289 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 A8MXQ7 604 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 CLDN5O00501 218 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 CACNG3O60359 315 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 STAU1O95793 577 aaKnown RBP6.52□□□□□ -1.37
RPA3-204ENST00000406109 GNA14O95837 355 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 FAM163BP0C2L3 166 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 P4HA1P13674 534 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 PLA2G2AP14555 144 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 GNSP15586 552 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 YWHAQP27348 245 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 ERCC5P28715 1186 aaPredicted RBP6.52□□□□□ -1.37
RPA3-204ENST00000406109 CD6P30203 668 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 ENPEPQ07075 957 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 C19orf57Q0VDD7 668 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 LRMPQ12912 555 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 MAPRE1Q15691 268 aaKnown RBP6.52□□□□□ -1.37
RPA3-204ENST00000406109 ANO4Q32M45 955 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 DPCR1Q3MIW9 517 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 MDH1BQ5I0G3 518 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 WDR45BQ5MNZ6 344 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 SYCP2LQ5T4T6 812 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 SPOPLQ6IQ16 392 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 CAVIN1Q6NZI2 390 aaKnown RBP6.52□□□□□ -1.37
RPA3-204ENST00000406109 FOXR2Q6PJQ5 311 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 PCSK4Q6UW60 755 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 SCARA5Q6ZMJ2 495 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 PAQR9Q6ZVX9 377 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 METTL3Q86U44 580 aaKnown RBP6.52□□□□□ -1.37
RPA3-204ENST00000406109 DDX42Q86XP3 938 aaKnown RBP eCLIP6.52□□□□□ -1.37
RPA3-204ENST00000406109 CHPFQ8IZ52 775 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 RGL4Q8IZJ4 473 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 ZNF843Q8N446 348 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 ZCCHC9Q8N567 271 aaKnown RBP6.52□□□□□ -1.37
RPA3-204ENST00000406109 TAS1R2Q8TE23 839 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 SETD7Q8WTS6 366 aaKnown RBP6.52□□□□□ -1.37
RPA3-204ENST00000406109 TAF4BQ92750 862 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 SEMA4DQ92854 862 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 MED15Q96RN5 788 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 UBL7Q96S82 380 aaPredicted RBP6.52□□□□□ -1.37
RPA3-204ENST00000406109 KCNK16Q96T55 309 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 B3GNT5Q9BYG0 378 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 ZNF518BQ9C0D4 1074 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 XYLT2Q9H1B5 865 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 PRDM16Q9HAZ2 1276 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 ITM2CQ9NQX7 267 aa6.52□□□□□ -1.37
RPA3-204ENST00000406109 TM7SF3Q9NS93 570 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms