RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 SLC4A5Q9BY07 1137 aa14.42□□□□□ -0.1
DUSP28-202ENST00000405954 SERPINB13Q9UIV8 391 aa14.42□□□□□ -0.1
DUSP28-202ENST00000405954 DUOX1Q9NRD9 1551 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 GTPBP10A4D1E9 387 aaKnown RBP14.41□□□□□ -0.1
DUSP28-202ENST00000405954 KBTBD13C9JR72 458 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 XRCC1P18887 633 aaPredicted RBP14.41□□□□□ -0.1
DUSP28-202ENST00000405954 ITGAXP20702 1163 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 SLC1A6P48664 564 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 GTF2IP78347 998 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 E2F2Q14209 437 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 SIX1Q15475 284 aaPredicted RBP14.41□□□□□ -0.1
DUSP28-202ENST00000405954 RFPL4BQ6ZWI9 263 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 PPIL6Q8IXY8 311 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 NEDD1Q8NHV4 660 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 ATP6V1E2Q96A05 226 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 NOL11Q9H8H0 719 aaKnown RBP14.41□□□□□ -0.1
DUSP28-202ENST00000405954 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.41□□□□□ -0.1
DUSP28-202ENST00000405954 TBC1D30Q9Y2I9 924 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.41□□□□□ -0.1
DUSP28-202ENST00000405954 USP17L15C9J2P7 530 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 USP17L13C9JLJ4 530 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 USP17L11C9JVI0 530 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 USP17L18D6R9N7 530 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 USP17L22D6RA61 530 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 USP17L17D6RBQ6 530 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 USP17L19D6RCP7 530 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 USP17L20D6RJB6 530 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 H7C0C1 242 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 CLOCKO15516 846 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 PHGDHO43175 533 aaKnown RBP14.41□□□□□ -0.1
DUSP28-202ENST00000405954 MED24O75448 989 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 SF3B1O75533 1304 aaKnown RBP eCLIP14.41□□□□□ -0.1
DUSP28-202ENST00000405954 CKMT2P17540 419 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 SAT1P21673 171 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 GCAP28676 217 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 ATP5OP48047 213 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 GAD2Q05329 585 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 USP17L24Q0WX57 530 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 NEK5Q6P3R8 708 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 SLC10A4Q96EP9 437 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 DGCR6LQ9BY27 220 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 IRF2BPLQ9H1B7 796 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 C1orf21Q9H246 121 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 C12orf4Q9NQ89 552 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 PNPOQ9NVS9 261 aa14.41□□□□□ -0.1
DUSP28-202ENST00000405954 CAPN14A8MX76 684 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 AP1G1O43747 822 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 ADSLP30566 484 aaPredicted RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 SEPHS1P49903 392 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 LSM3P62310 102 aaKnown RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 DLG4P78352 724 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 SF3B3Q15393 1217 aaKnown RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 RSBN1LQ6PCB5 846 aaPredicted RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 ADGRD1Q6QNK2 874 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 CCDC81Q6ZN84 652 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 CHSY1Q86X52 802 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 LINC00116Q8NCU8 138 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 PSMA8Q8TAA3 256 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 FNIP1Q8TF40 1166 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 CHPT1Q8WUD6 406 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 CCDC106Q9BWC9 280 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 CALN1Q9BXU9 219 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 TP63Q9H3D4 680 aaPredicted RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 SORCS3Q9UPU3 1222 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 SHOC2Q9UQ13 582 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 ERGIC3Q9Y282 383 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 USP17L5A8MUK1 530 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 CLDN25C9JDP6 229 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 CLASP2O75122 1294 aaKnown RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 CRYZL1O95825 349 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 TFE3P19532 575 aaPredicted RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 VAMP7P51809 220 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 THOP1P52888 689 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 TMEM119Q4V9L6 283 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 FAM209AQ5JX71 171 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 GATAD2AQ86YP4 633 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 MMAAQ8IVH4 418 aaKnown RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 NYXQ9GZU5 481 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 ZC3H7BQ9UGR2 993 aaKnown RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 ITGA11Q9UKX5 1188 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 GPSM3Q9Y4H4 160 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 GZMAP12544 262 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 KRT6CP48668 564 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 STX1BP61266 288 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 RPS8P62241 208 aaKnown RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 MAPRE1Q15691 268 aaKnown RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 SHROOM1Q2M3G4 852 aaPredicted RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 DARS2Q6PI48 645 aaKnown RBP14.4□□□□□ -0.1
DUSP28-202ENST00000405954 ELMSAN1Q6PJG2 1045 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 SLC26A11Q86WA9 606 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 ELMOD2Q8IZ81 293 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 OFCC1Q8IZS5 231 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 PAF1Q8N7H5 531 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 TNIP2Q8NFZ5 429 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 OR7G1Q8NGA0 311 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 LRTOMTQ8WZ04 291 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 ATXN7L3BQ96GX2 97 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 CNDP1Q96KN2 507 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 C7orf26Q96N11 449 aa14.4□□□□□ -0.1
DUSP28-202ENST00000405954 MTMR9Q96QG7 549 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms