RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	TPGS2	Q68CL5	300 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	HAUS3	Q68CZ6	603 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ZNF280D	Q6N043	979 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	HAUS6	Q7Z4H7	955 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MTDH	Q86UE4	582 aa	Known RBP	7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	LONP2	Q86WA8	852 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TCEAL8	Q8IYN2	117 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	APPL2	Q8NEU8	664 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	MAGEB10	Q96LZ2	347 aa	Predicted RBP	7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	PLA2G2F	Q9BZM2	168 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ZNF552	Q9H707	407 aa	Predicted RBP	7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	C8orf33	Q9H7E9	229 aa	Predicted RBP	7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	ZNF334	Q9HCZ1	680 aa	Predicted RBP	7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	TUFT1	Q9NNX1	390 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	COA3	Q9Y2R0	106 aa	Predicted RBP	7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	INSL5	Q9Y5Q6	135 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	DCHS1	Q96JQ0	3298 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CACNA1B	Q00975	2339 aa		7.34	□□□□□ -1.23
CEACAM1-208	ENST00000403461	CEP250	Q9BV73	2442 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ZNF292	O60281	2723 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	LRRC10B	A6NIK2	292 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461		I3L4J1	428 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	HRK	O00198	91 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CRTAM	O95727	393 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MYL4	P12829	197 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TGM1	P22735	817 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	FCAR	P24071	287 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CCNE1	P24864	410 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MARCKS	P29966	332 aa	Predicted RBP	7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	RPL9	P32969	192 aa	Known RBP	7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	YBX1	P67809	324 aa	Known RBP	7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	GUCY1A3	Q02108	690 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PTPA	Q15257	358 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	NAB2	Q15742	525 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	UPP1	Q16831	310 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CTXN3	Q4LDR2	81 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ATF7IP2	Q5U623	682 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	KIFAP3	Q92845	792 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CLUHP3	Q96NS8	147 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PPP1R10	Q96QC0	940 aa	Known RBP	7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TM6SF1	Q9BZW5	370 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TRIM39	Q9HCM9	518 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	KLHL14	Q9P2G3	628 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ORC3	Q9UBD5	711 aa	Predicted RBP	7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PCDHA9	Q9Y5H5	950 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ACACB	O00763	2458 aa		7.33	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SMIM28	A0A1B0GU29	152 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	NUDT19	A8MXV4	375 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461		K7ERI5	159 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ABLIM3	O94929	683 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PAPSS2	O95340	614 aa	Predicted RBP	7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	FGF19	O95750	216 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CHRNB1	P11230	501 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TDGF1	P13385	188 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CYP11B2	P19099	503 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	GRK2	P25098	689 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	GRK3	P35626	688 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	VIPR2	P41587	438 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	BRCC3	P46736	316 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	FNTB	P49356	437 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SATB1	Q01826	763 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TWF1	Q12792	350 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PAK1	Q13153	545 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ANKRD1	Q15327	319 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	SAFB	Q15424	915 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ZNF124	Q15973	351 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MLANA	Q16655	118 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ZNF568	Q3ZCX4	644 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ARHGAP15	Q53QZ3	475 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	VIT	Q6UXI7	678 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	RPTN	Q6XPR3	784 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	BRAP	Q7Z569	592 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	USP37	Q86T82	979 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CATSPER3	Q86XQ3	398 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	MFSD6L	Q8IWD5	586 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PEX11G	Q96HA9	241 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	DIRC2	Q96SL1	478 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TCHP	Q9BT92	498 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	POLR3C	Q9BUI4	534 aa	Predicted RBP	7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	EPB41L4B	Q9H329	900 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	EPB41L1	Q9H4G0	881 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TRPV4	Q9HBA0	871 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PPARGC1A	Q9UBK2	798 aa	Known RBP	7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	AFF4	Q9UHB7	1163 aa	Known RBP	7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	FBXL5	Q9UKA1	691 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	NUDT5	Q9UKK9	219 aa		7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	TPR	P12270	2363 aa	Known RBP	7.32	□□□□□ -1.24
CEACAM1-208	ENST00000403461	VPS13A	Q96RL7	3174 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461		A0A087WWV3	80 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CCDC169	A6NNP5	214 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	HEPACAM2	A8MVW5	462 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	FAM47E-STBD1	D6RA91	191 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	WNT9A	O14904	365 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CHAD	O15335	359 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	PFKFB2	O60825	505 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	ATG13	O75143	517 aa		7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	RPP40	O75818	363 aa	Known RBP	7.31	□□□□□ -1.24
CEACAM1-208	ENST00000403461	CCDC192	P0DO97	292 aa		7.31	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms