RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 LVRNQ6Q4G3 990 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 RFX8Q6ZV50 586 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 HFE2Q6ZVN8 426 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 LRRC6Q86X45 466 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 SMARCD1Q96GM5 515 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 ACBD6Q9BR61 282 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 VPS11Q9H270 941 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 PIGVQ9NUD9 493 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 KLHL14Q9P2G3 628 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 GRID1Q9ULK0 1009 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 PADI3Q9ULW8 664 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 GABRQQ9UN88 632 aa14.77□□□□□ -0.04
MKS1-203ENST00000393120 YJEFN3A6XGL0 299 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 E7ENQ6 273 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 F9P00740 461 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 APOEP02649 317 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 ODC1P11926 461 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 ALADP13716 330 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 VAV1P15498 845 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 SEMA3BQ13214 749 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 TIGD5Q53EQ6 642 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 SYCP2LQ5T4T6 812 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 LGSNQ5TDP6 509 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 TTC39BQ5VTQ0 682 aaPredicted RBP14.76□□□□□ -0.05
MKS1-203ENST00000393120 FAM171BQ6P995 826 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 ZNF276Q8N554 614 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 IRGQQ8WZA9 623 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 WDR6Q9NNW5 1121 aaKnown RBP14.76□□□□□ -0.05
MKS1-203ENST00000393120 XPNPEP3Q9NQH7 507 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 CACNG4Q9UBN1 327 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 FBXW11Q9UKB1 542 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 DSEQ9UL01 958 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 CAPN9O14815 690 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 PPP1R12AO14974 1030 aaPredicted RBP14.76□□□□□ -0.05
MKS1-203ENST00000393120 DCLK1O15075 740 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 MFSD11O43934 449 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 EDF1O60869 148 aaKnown RBP14.76□□□□□ -0.05
MKS1-203ENST00000393120 RASSF9O75901 435 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 ASGR1P07306 291 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 SKIP12755 728 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 THPOP40225 353 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 CACNB2Q08289 660 aaPredicted RBP14.76□□□□□ -0.05
MKS1-203ENST00000393120 CCDC15Q0P6D6 951 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 FAAP100Q0VG06 881 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 NME3Q13232 169 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 ZKSCAN8Q15776 578 aaPredicted RBP14.76□□□□□ -0.05
MKS1-203ENST00000393120 FAM26DQ5JW98 314 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 PM20D1Q6GTS8 502 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 UNC5AQ6ZN44 842 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 PDZD4Q76G19 769 aaPredicted RBP14.76□□□□□ -0.05
MKS1-203ENST00000393120 PRPF39Q86UA1 669 aaKnown RBP14.76□□□□□ -0.05
MKS1-203ENST00000393120 GSDMBQ8TAX9 411 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 TCP10LQ8TDR4 215 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 LRRC8CQ8TDW0 803 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 LRRN4Q8WUT4 740 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 PGBD4Q96DM1 585 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 CFAP36Q96G28 342 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 KCNK16Q96T55 309 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 RTP3Q9BQQ7 232 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 ARHGAP39Q9C0H5 1083 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 RXFP1Q9HBX9 757 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 ABCF3Q9NUQ8 709 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 PHTF1Q9UMS5 762 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 MFHAS1Q9Y4C4 1052 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 TIMM13Q9Y5L4 95 aaPredicted RBP14.76□□□□□ -0.05
MKS1-203ENST00000393120 SQORQ9Y6N5 450 aa14.76□□□□□ -0.05
MKS1-203ENST00000393120 M0QZQ0 153 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 EEF2KO00418 725 aaKnown RBP14.75□□□□□ -0.05
MKS1-203ENST00000393120 NCAM2O15394 837 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 PIAS1O75925 651 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 KRT37O76014 449 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 LTFP02788 710 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 DHRS4L1P0CG22 281 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 CD52P31358 61 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 NEK3P51956 506 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 DNAJC3Q13217 504 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 KCNA10Q16322 511 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 PARP6Q2NL67 630 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 SRCAPQ6ZRS2 3230 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 BEND5Q7L4P6 421 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 BHLHA9Q7RTU4 235 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 METTL23Q86XA0 190 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 CCNJLQ8IV13 435 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 RNF169Q8NCN4 708 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 SLC7A14Q8TBB6 771 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 ZNF75CPQ92670 426 aaPredicted RBP14.75□□□□□ -0.05
MKS1-203ENST00000393120 MTBPQ96DY7 904 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 P2RY11Q96G91 374 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 APOPT1Q96IL0 206 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 UROC1Q96N76 676 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 LGMNQ99538 433 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 BRD8Q9H0E9 1235 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 TMEM30AQ9NV96 361 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.75□□□□□ -0.05
MKS1-203ENST00000393120 PCDHA11Q9Y5I1 949 aa14.75□□□□□ -0.05
MKS1-203ENST00000393120 CASTOR2A6NHX0 329 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 FAM159BA6NKW6 160 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 INPPL1O15357 1258 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 MGEA5O60502 916 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 ALDH1A1P00352 501 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms