RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PLEKHM3Q6ZWE6 761 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 SLC38A7Q9NVC3 462 aa20.19■□□□□ 0.82
SHANK1-203ENST00000391813 DRG1Q9Y295 367 aaKnown RBP20.19■□□□□ 0.82
SHANK1-203ENST00000391813 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.19■□□□□ 0.82
SHANK1-203ENST00000391813 MAGEB16A2A368 324 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 DCDC2CA8MYV0 355 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 RBAK-RBAKDNI3L0D1 243 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 MRASO14807 208 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 NPM3O75607 178 aaKnown RBP20.18■□□□□ 0.82
SHANK1-203ENST00000391813 ATP6V1B2P21281 511 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 POU4F1Q01851 419 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 GRTP1Q5TC63 336 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 USP33Q8TEY7 942 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 RAD21L1Q9H4I0 556 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 GPAMQ9HCL2 828 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 TPRKBQ9Y3C4 175 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 TCRBV5S4A2TA0A5A2 114 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 C5orf58C9J3I9 102 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 ADM5C9JUS6 153 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 NR5A2O00482 541 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 PSMB9P28065 219 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 PPIL2Q13356 520 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 GLB1LQ6UWU2 654 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 COMMD8Q9NX08 183 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 STK39Q9UEW8 545 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 EIF3LQ9Y262 564 aaKnown RBP20.18■□□□□ 0.82
SHANK1-203ENST00000391813 EPHB6O15197 1021 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 PURAQ00577 322 aaKnown RBP20.18■□□□□ 0.82
SHANK1-203ENST00000391813 CCDC142Q17RM4 750 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 FUT11Q495W5 492 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 MFSD7Q6UXD7 560 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 KDELC2Q7Z4H8 507 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 ULK2Q8IYT8 1036 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 GANQ9H2C0 597 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 AAR2Q9Y312 384 aaKnown RBP20.18■□□□□ 0.82
SHANK1-203ENST00000391813 SUPT20HL2P0C7V6 817 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 TRIM25Q14258 630 aaKnown RBP20.18■□□□□ 0.82
SHANK1-203ENST00000391813 ZNF484Q5JVG2 852 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 SPON2Q9BUD6 331 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 KCTD10Q9H3F6 313 aa20.18■□□□□ 0.82
SHANK1-203ENST00000391813 UMODL1Q5DID0 1318 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 MTTPP55157 894 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 TLK2Q86UE8 772 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 TRABD2AQ86V40 505 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 OR8H2Q8N162 312 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 CATSPERBQ9H7T0 1116 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 SLCO1B3Q9NPD5 702 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 PNPLA3Q9NST1 481 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 CPA4Q9UI42 421 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 POLIQ9UNA4 740 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 C15orf38-AP3S2A0A0A6YYH1 394 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 DPYSL4O14531 572 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 WBP4O75554 376 aaKnown RBP20.17■□□□□ 0.82
SHANK1-203ENST00000391813 SERPINA6P08185 405 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 ARPINQ7Z6K5 226 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 RASGEF1CQ8N431 466 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 BORCS5Q969J3 196 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 TBCBQ99426 244 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 ZMYM2Q9UBW7 1377 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 FAM237BA0A1B0GVD1 139 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 TGFB3P10600 412 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 VDRP11473 427 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 GEMP55040 296 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 CYP24A1Q07973 514 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 SPANXN2Q5MJ10 180 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 TTC23LQ6PF05 361 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 RMI1Q9H9A7 625 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 RAD54BQ9Y620 910 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 GSC2O15499 205 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 LCA5LO95447 670 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 IL12RB1P42701 662 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 GLRBP48167 497 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 ILF2Q12905 390 aaKnown RBP20.17■□□□□ 0.82
SHANK1-203ENST00000391813 RNF220Q5VTB9 566 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 OLFML1Q6UWY5 402 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.17■□□□□ 0.82
SHANK1-203ENST00000391813 CENPLQ8N0S6 344 aaPredicted RBP20.17■□□□□ 0.82
SHANK1-203ENST00000391813 APPL2Q8NEU8 664 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 UBA3Q8TBC4 463 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 GIPC3Q8TF64 312 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 KCTD14Q9BQ13 255 aaPredicted RBP20.17■□□□□ 0.82
SHANK1-203ENST00000391813 OSBPL11Q9BXB4 747 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 USE1Q9NZ43 259 aa20.17■□□□□ 0.82
SHANK1-203ENST00000391813 CDH3P22223 829 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 SLC25A3Q00325 362 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 ATP6AP1LQ52LC2 224 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 CACHD1Q5VU97 1274 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.16■□□□□ 0.82
SHANK1-203ENST00000391813 WDR41Q9HAD4 459 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 ADGRA2Q96PE1 1338 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 AKT1P31749 480 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 KRT20P35900 424 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 FOLH1Q04609 750 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 FASTKQ14296 549 aaKnown RBP20.16■□□□□ 0.82
SHANK1-203ENST00000391813 DCAF6Q58WW2 860 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 MRNIPQ6NTE8 343 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 OTOAQ7RTW8 1153 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 PURBQ96QR8 312 aaKnown RBP20.16■□□□□ 0.82
SHANK1-203ENST00000391813 APOL4Q9BPW4 351 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms