RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 PRDM16Q9HAZ2 1276 aa21.02■□□□□ 0.96
CPNE9-202ENST00000383831 USP29Q9HBJ7 922 aa21.02■□□□□ 0.96
CPNE9-202ENST00000383831 MED4Q9NPJ6 270 aa21.02■□□□□ 0.96
CPNE9-202ENST00000383831 SPG21Q9NZD8 308 aa21.02■□□□□ 0.96
CPNE9-202ENST00000383831 DTLQ9NZJ0 730 aa21.02■□□□□ 0.96
CPNE9-202ENST00000383831 TPX2Q9ULW0 747 aaKnown RBP21.02■□□□□ 0.96
CPNE9-202ENST00000383831 PLAAQ9Y263 795 aa21.02■□□□□ 0.96
CPNE9-202ENST00000383831 SNX10Q9Y5X0 201 aa21.02■□□□□ 0.96
CPNE9-202ENST00000383831 BCLAF3A2AJT9 711 aaKnown RBP21.01■□□□□ 0.95
CPNE9-202ENST00000383831 ATF6P18850 670 aa21.01■□□□□ 0.95
CPNE9-202ENST00000383831 STIP1P31948 543 aaKnown RBP21.01■□□□□ 0.95
CPNE9-202ENST00000383831 NR2C2P49116 596 aa21.01■□□□□ 0.95
CPNE9-202ENST00000383831 SLMAPQ14BN4 828 aa21.01■□□□□ 0.95
CPNE9-202ENST00000383831 CCDC25Q86WR0 208 aa21.01■□□□□ 0.95
CPNE9-202ENST00000383831 CCDC33Q8N5R6 958 aa21.01■□□□□ 0.95
CPNE9-202ENST00000383831 GIPC2Q8TF65 315 aa21.01■□□□□ 0.95
CPNE9-202ENST00000383831 LRRN4Q8WUT4 740 aa21.01■□□□□ 0.95
CPNE9-202ENST00000383831 BADQ92934 168 aa21.01■□□□□ 0.95
CPNE9-202ENST00000383831 RUFY1Q96T51 708 aa21.01■□□□□ 0.95
CPNE9-202ENST00000383831 EPB41L4BQ9H329 900 aa21.01■□□□□ 0.95
CPNE9-202ENST00000383831 ARHGEF38Q9NXL2 777 aa21.01■□□□□ 0.95
CPNE9-202ENST00000383831 MFSD11O43934 449 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 RBL1P28749 1068 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 PPIGQ13427 754 aaKnown RBP eCLIP21■□□□□ 0.95
CPNE9-202ENST00000383831 HSP90B2PQ58FF3 399 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 SPDYCQ5MJ68 293 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 RNASEH2BQ5TBB1 312 aaKnown RBP21■□□□□ 0.95
CPNE9-202ENST00000383831 PWWP2AQ96N64 755 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 COMMD8Q9NX08 183 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 MKI67P46013 3256 aaKnown RBP21■□□□□ 0.95
CPNE9-202ENST00000383831 CFAP69A5D8W1 941 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 SLC38A8A6NNN8 435 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 H0YGN5 161 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 DCLK1O15075 740 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 KCNN4O15554 427 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 FGBP02675 491 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 RARGP13631 454 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 HCAR3P49019 387 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 TPI1P60174 286 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 FPGSQ05932 587 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 TAF10Q12962 218 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 XRCC4Q13426 336 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 BRMS1LQ5PSV4 323 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 MSANTD2Q6P1R3 559 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 DDX53Q86TM3 631 aaKnown RBP21■□□□□ 0.95
CPNE9-202ENST00000383831 CDKL3Q8IVW4 592 aaPredicted RBP21■□□□□ 0.95
CPNE9-202ENST00000383831 OLFM3Q96PB7 478 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 SH3GL2Q99962 352 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 OR12D3Q9UGF7 316 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 PRKAG2Q9UGJ0 569 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 AFF4Q9UHB7 1163 aaKnown RBP21■□□□□ 0.95
CPNE9-202ENST00000383831 NFS1Q9Y697 457 aa21■□□□□ 0.95
CPNE9-202ENST00000383831 UBAP2Q5T6F2 1119 aaKnown RBP20.99■□□□□ 0.95
CPNE9-202ENST00000383831 LRIG3Q6UXM1 1119 aa20.99■□□□□ 0.95
CPNE9-202ENST00000383831 OR2W6PQ8NHA6 318 aa20.99■□□□□ 0.95
CPNE9-202ENST00000383831 RTP4Q96DX8 246 aa20.99■□□□□ 0.95
CPNE9-202ENST00000383831 SERPINB11Q96P15 392 aa20.99■□□□□ 0.95
CPNE9-202ENST00000383831 QKIQ96PU8 341 aaKnown RBP eCLIP20.99■□□□□ 0.95
CPNE9-202ENST00000383831 PABPC3Q9H361 631 aaKnown RBP20.99■□□□□ 0.95
CPNE9-202ENST00000383831 SEMA4AQ9H3S1 761 aa20.99■□□□□ 0.95
CPNE9-202ENST00000383831 DNAJC17Q9NVM6 304 aaKnown RBP20.99■□□□□ 0.95
CPNE9-202ENST00000383831 ABLIM3O94929 683 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 SEC24AO95486 1093 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 ERCC2P18074 760 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 CCR1P32246 355 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 MORF4L2Q15014 288 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 PAFAH1B3Q15102 231 aaKnown RBP20.98■□□□□ 0.95
CPNE9-202ENST00000383831 SLC45A4Q5BKX6 768 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 FAM182AQ5T1J6 154 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 RASIP1Q5U651 963 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 ZCCHC9Q8N567 271 aaKnown RBP20.98■□□□□ 0.95
CPNE9-202ENST00000383831 TAB3Q8N5C8 712 aaPredicted RBP20.98■□□□□ 0.95
CPNE9-202ENST00000383831 CPT1BQ92523 772 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 EPAS1Q99814 870 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 OSBPL2Q9H1P3 480 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 TLR8Q9NR97 1041 aaKnown RBP20.98■□□□□ 0.95
CPNE9-202ENST00000383831 CLIC5Q9NZA1 410 aa20.98■□□□□ 0.95
CPNE9-202ENST00000383831 FARP1Q9Y4F1 1045 aaPredicted RBP20.98■□□□□ 0.95
CPNE9-202ENST00000383831 CARNS1A5YM72 827 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 LRIG2O94898 1065 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 GJB5O95377 273 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 URODP06132 367 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 TUFMP49411 452 aaKnown RBP20.97■□□□□ 0.95
CPNE9-202ENST00000383831 ZNF135P52742 658 aaPredicted RBP20.97■□□□□ 0.95
CPNE9-202ENST00000383831 PPP2R5DQ14738 602 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 VPS52Q8N1B4 723 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 NETO2Q8NC67 525 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 ZNF461Q8TAF7 563 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 TSPYL1Q9H0U9 437 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.97■□□□□ 0.95
CPNE9-202ENST00000383831 SHOC2Q9UQ13 582 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 OPA1O60313 960 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 PAGE1O75459 146 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 PSEN1P49768 467 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 HTRA4P83105 476 aaPredicted RBP20.97■□□□□ 0.95
CPNE9-202ENST00000383831 PCGF5Q86SE9 256 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 PPIL6Q8IXY8 311 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 AUTS2Q8WXX7 1259 aa20.97■□□□□ 0.95
CPNE9-202ENST00000383831 PRCCQ92733 491 aaPredicted RBP20.97■□□□□ 0.95
CPNE9-202ENST00000383831 HAPLN3Q96S86 360 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms