RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 TRPM3Q9HCF6 1732 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 RBAK-RBAKDNI3L0D1 243 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 OPHN1O60890 802 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 MED24O75448 989 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 PPP1R37O75864 691 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 GLI1P08151 1106 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 FAM153BP0C7A2 387 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 PSMC3P17980 439 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 GARTP22102 1010 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ILF3Q12906 894 aaKnown RBP eCLIP6.75□□□□□ -1.333e-10■■■□□ 16.4
NEDD9-202ENST00000379446 FAM153CQ494X1 144 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 EEF1DP3Q658K8 133 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 RAET1GQ6H3X3 334 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 RAB44Q7Z6P3 723 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ALYREFQ86V81 257 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 TRAPPC5Q8IUR0 188 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 JPH3Q8WXH2 748 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 NECAB3Q96P71 396 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 FANCEQ9HB96 536 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ZFYVE1Q9HBF4 777 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 FAM153AQ9UHL3 310 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ATP8A1Q9Y2Q0 1164 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 HBS1LQ9Y450 684 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 SIPA1L3O60292 1781 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 RAD51CO43502 376 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 EIF2S1P05198 315 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 EPCAMP16422 314 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 PAMP19021 973 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 TKTP29401 623 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 PAPOLAP51003 745 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CLCNKBP51801 687 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CAP1Q01518 475 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ADIGQ0VDE8 80 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 SEMA3FQ13275 785 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ZNF211Q13398 564 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 TMEM240Q5SV17 173 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CHST9Q7L1S5 443 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 DGLUCYQ7Z3D6 616 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 ARID3BQ8IVW6 561 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 MMGT1Q8N4V1 131 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 MYLPFQ96A32 169 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 IGSF21Q96ID5 467 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 SERPINB11Q96P15 392 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 TLR10Q9BXR5 811 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 CXXC1Q9P0U4 656 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 IGSF9Q9P2J2 1179 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 VANGL2Q9ULK5 521 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 RUVBL2Q9Y230 463 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 UTP11Q9Y3A2 253 aaKnown RBP6.75□□□□□ -1.33
NEDD9-202ENST00000379446 UBIAD1Q9Y5Z9 338 aa6.75□□□□□ -1.33
NEDD9-202ENST00000379446 A0A1W2PQJ5 194 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 TNFRSF10AO00220 468 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 PGRMC1O00264 195 aaKnown RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 KLF8O95600 359 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 FGRP09769 529 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 PTPN1P18031 435 aaKnown RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 AKT2P31751 481 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 GTF2H1P32780 548 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 CSTF2P33240 577 aaKnown RBP eCLIP6.74□□□□□ -1.331e-7■■■□□ 19
NEDD9-202ENST00000379446 VCPP55072 806 aaKnown RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 POLR2LP62875 67 aaKnown RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 SIM1P81133 766 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 ITPRIPL1Q6GPH6 555 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 C16orf46Q6P387 395 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 FBF1Q8TES7 1133 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 TSC22D3Q99576 134 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 SLC38A3Q99624 504 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 PHF7Q9BWX1 381 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 FGFBP2Q9BYJ0 223 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 TBC1D17Q9HA65 648 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 SALL4Q9UJQ4 1053 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 OGDHLQ9ULD0 1010 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 SORCS3Q9UPU3 1222 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 SIK3Q9Y2K2 1263 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 COL1A2P08123 1366 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 TCRBV21S2A2A0A5A6 115 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 ZBTB39O15060 712 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 RAMP2O60895 175 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 CPP00450 1065 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 F9P00740 461 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 RHOP08100 348 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 GLRA2P23416 452 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 CYP2F1P24903 491 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 GPR1P46091 355 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 PEX5P50542 639 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 CASP6P55212 293 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 DHX9Q08211 1270 aaKnown RBP6.74□□□□□ -1.33
NEDD9-202ENST00000379446 SMARCB1Q12824 385 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 LPIN1Q14693 890 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 PON2Q15165 354 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 KLHDC7AQ5VTJ3 777 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 CEP120Q8N960 986 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 SUN3Q8TAQ9 357 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 MDM1Q8TC05 714 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 ZFYVE19Q96K21 471 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 SH3GL3Q99963 347 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 GPR174Q9BXC1 333 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 AMACRQ9UHK6 382 aa6.74□□□□□ -1.33
NEDD9-202ENST00000379446 LNPEPQ9UIQ6 1025 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms