RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 BPGMP07738 259 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 AKAP5P24588 427 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 NR2C2P49116 596 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 ACSBG2Q5FVE4 666 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 MDH1BQ5I0G3 518 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 ATG16L1Q676U5 607 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 FAM131BQ86XD5 332 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 TRIM42Q8IWZ5 723 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 STKLD1Q8NE28 680 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 FBXO27Q8NI29 283 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 HTR3CQ8WXA8 447 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 APBB2Q92870 758 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 LBHD1Q9BQE6 289 aaPredicted RBP20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 FAM167BQ9BTA0 163 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 MOCS1Q9NZB8 636 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 RARBP10826 455 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 SMPD1P17405 629 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 TKTP29401 623 aaKnown RBP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 CRHR1P34998 444 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 RPL34P49207 117 aaKnown RBP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 SNX16P57768 344 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 PITX1P78337 314 aaPredicted RBP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 IRX4P78413 519 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 SMAD1Q15797 465 aaKnown RBP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 APBB1IPQ7Z5R6 666 aaPredicted RBP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 SLC2A14Q8TDB8 520 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 OSMRQ99650 979 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 CEP41Q9BYV8 373 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 LRRC42Q9Y546 428 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 CAPN14A8MX76 684 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 SNNO75324 88 aaPredicted RBP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 KRT36O76013 467 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 OTUD1Q5VV17 481 aaPredicted RBP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 STEAP4Q687X5 459 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 TFB1MQ8WVM0 346 aaKnown RBP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 WDR60Q8WVS4 1066 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 MCUR1Q96AQ8 359 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 DCLRE1BQ9H816 532 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 BATF3Q9NR55 127 aa20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 PPARGC1AQ9UBK2 798 aaKnown RBP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 HBS1LQ9Y450 684 aaKnown RBP20.13■□□□□ 0.81
SHROOM1-202ENST00000378676 PCNTO95613 3336 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 A0A0A0MRY4 1105 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 EIF4E1BA6NMX2 242 aaKnown RBP20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 ADCY6O43306 1168 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 SERPINB9P50453 376 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 ALKAL1Q6UXT8 129 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 GPRC5AQ8NFJ5 357 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 SPATA13Q96N96 652 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 GOLGA2P5Q9HBQ8 144 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 KLK14Q9P0G3 267 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 GPR32O75388 356 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 ENO1P06733 434 aaKnown RBP20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 AQP5P55064 265 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 SESN3P58005 492 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 NIPAL4Q0D2K0 466 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 FBXO47Q5MNV8 452 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 TRIM68Q6AZZ1 485 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 C16orf46Q6P387 395 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 MARK2Q7KZI7 788 aaKnown RBP20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 DEFB106AQ8N104 65 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 PDCD7Q8N8D1 485 aaKnown RBP20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 ANKRD27Q96NW4 1050 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 EMCNQ9ULC0 261 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 FZD10Q9ULW2 581 aa20.12■□□□□ 0.81
SHROOM1-202ENST00000378676 GSRP00390 522 aa20.11■□□□□ 0.81
SHROOM1-202ENST00000378676 SCNN1AP37088 669 aa20.11■□□□□ 0.81
SHROOM1-202ENST00000378676 SULT1E1P49888 294 aa20.11■□□□□ 0.81
SHROOM1-202ENST00000378676 RCN1Q15293 331 aa20.11■□□□□ 0.81
SHROOM1-202ENST00000378676 DPY19L2Q6NUT2 758 aa20.11■□□□□ 0.81
SHROOM1-202ENST00000378676 CASC4Q6P4E1 433 aa20.11■□□□□ 0.81
SHROOM1-202ENST00000378676 ARCQ7LC44 396 aa20.11■□□□□ 0.81
SHROOM1-202ENST00000378676 CRYBG2Q8N1P7 616 aa20.11■□□□□ 0.81
SHROOM1-202ENST00000378676 TEX9Q8N6V9 391 aa20.11■□□□□ 0.81
SHROOM1-202ENST00000378676 COLGALT1Q8NBJ5 622 aa20.11■□□□□ 0.81
SHROOM1-202ENST00000378676 SHROOM3Q8TF72 1996 aa20.11■□□□□ 0.81
SHROOM1-202ENST00000378676 LMNAP02545 664 aaKnown RBP20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 MGAT1P26572 445 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 GNL1P36915 607 aaPredicted RBP20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 SESN2P58004 480 aaPredicted RBP20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 TIFABQ6ZNK6 161 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 STRADAQ7RTN6 431 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 OR6J1Q8NGC5 347 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 GCOM2Q9BZD3 368 aaPredicted RBP20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 TRIM6Q9C030 488 aaPredicted RBP20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 PSAT1Q9Y617 370 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 DCAF8L1A6NGE4 600 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 H3BRJ5 948 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 RNF103O00237 685 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 PIRO00625 290 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 ALDH1A2O94788 518 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 ALDOAP04075 364 aaKnown RBP20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 ARL4AP40617 200 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 NOTUMQ6P988 496 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 CRLF3Q8IUI8 442 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 ARNTL2Q8WYA1 636 aa20.1■□□□□ 0.81
SHROOM1-202ENST00000378676 ZNF778Q96MU6 729 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms