RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.17■□□□□ 0.02
UBA1-202ENST00000377269 ESRRAP11474 423 aaPredicted RBP15.16■□□□□ 0.02
UBA1-202ENST00000377269 CD58P19256 250 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 RRM1P23921 792 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 GRIA2P42262 883 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 RAP1GAPP47736 663 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 HPCAP84074 193 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 DEUP1Q05D60 604 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 LVRNQ6Q4G3 990 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 SLC24A5Q71RS6 500 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 SLC47A2Q86VL8 602 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 PPP1R10Q96QC0 940 aaKnown RBP15.16■□□□□ 0.02
UBA1-202ENST00000377269 PAAF1Q9BRP4 392 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 TRIM55Q9BYV6 548 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 DCLK3Q9C098 648 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 TSPYL2Q9H2G4 693 aaPredicted RBP15.16■□□□□ 0.02
UBA1-202ENST00000377269 NDE1Q9NXR1 346 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 ITGA11Q9UKX5 1188 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 ENPP3O14638 875 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 KRT5P13647 590 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 KRT15P19012 456 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 ACO1P21399 889 aaKnown RBP15.16■□□□□ 0.02
UBA1-202ENST00000377269 MAGEA10P43363 369 aaPredicted RBP15.16■□□□□ 0.02
UBA1-202ENST00000377269 ASPAP45381 313 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 CDK16Q00536 496 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 TRMT5Q32P41 509 aaKnown RBP15.16■□□□□ 0.02
UBA1-202ENST00000377269 KLC3Q6P597 504 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 NT5DC4Q86YG4 428 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 FAM71AQ8IYT1 594 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 BEST2Q8NFU1 509 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 MPP4Q96JB8 637 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 PHACTR1Q9C0D0 580 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 RSAD1Q9HA92 442 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 RHBDL2Q9NX52 303 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 UBQLN1Q9UMX0 589 aaKnown RBP15.16■□□□□ 0.02
UBA1-202ENST00000377269 MTO1Q9Y2Z2 717 aaKnown RBP15.16■□□□□ 0.02
UBA1-202ENST00000377269 DERAQ9Y315 318 aa15.16■□□□□ 0.02
UBA1-202ENST00000377269 BUD23O43709 281 aaKnown RBP15.15■□□□□ 0.02
UBA1-202ENST00000377269 ACTR3P61158 418 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 AP2B1P63010 937 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 RBP5P82980 135 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 ZNF394Q53GI3 561 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 C9orf57Q5W0N0 161 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 ADGRG6Q86SQ4 1221 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 NOP9Q86U38 636 aaKnown RBP15.15■□□□□ 0.02
UBA1-202ENST00000377269 ZCCHC9Q8N567 271 aaKnown RBP15.15■□□□□ 0.02
UBA1-202ENST00000377269 ATG4AQ8WYN0 398 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 DGCR14Q96DF8 476 aaKnown RBP15.15■□□□□ 0.02
UBA1-202ENST00000377269 RBM15Q96T37 977 aaKnown RBP eCLIP15.15■□□□□ 0.02
UBA1-202ENST00000377269 NIF3L1Q9GZT8 377 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 SDCBP2Q9H190 292 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 SMYD3Q9H7B4 428 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 TMEM165Q9HC07 324 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 GPAMQ9HCL2 828 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 CHORDC1Q9UHD1 332 aaPredicted RBP15.15■□□□□ 0.02
UBA1-202ENST00000377269 A0A0J9YVX5 310 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 SPTLC1O15269 473 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 CYP1A2P05177 515 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 GZMAP12544 262 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 SERPINB3P29508 390 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 ARFIP2P53365 341 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 TMEM270Q6UE05 265 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 PHLDB2Q86SQ0 1253 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 ZNF564Q8TBZ8 553 aaPredicted RBP15.15■□□□□ 0.02
UBA1-202ENST00000377269 DDX27Q96GQ7 796 aaKnown RBP15.15■□□□□ 0.02
UBA1-202ENST00000377269 PRR11Q96HE9 360 aaPredicted RBP15.15■□□□□ 0.02
UBA1-202ENST00000377269 CATSPER2Q96P56 530 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 EBF3Q9H4W6 596 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 PPCSQ9HAB8 311 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 KCNK13Q9HB14 408 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 ARHGEF4Q9NR80 690 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 GIT1Q9Y2X7 761 aa15.15■□□□□ 0.02
UBA1-202ENST00000377269 SCN5AQ14524 2016 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 A0A0G2JND7 137 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 TGDSO95455 350 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 FAM189BP81408 668 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 ORC1Q13415 861 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 ZNF667Q5HYK9 610 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 CFAP157Q5JU67 520 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 TMCO4Q5TGY1 634 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 IZUMO3Q5VZ72 239 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 UBE2Q1Q7Z7E8 422 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 TMPRSS6Q8IU80 811 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 HACE1Q8IYU2 909 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 CCDC89Q8N998 374 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 SEPT8Q92599 483 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 CHMP2BQ9UQN3 213 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.14■□□□□ 0.01
UBA1-202ENST00000377269 CASTOR2A6NHX0 329 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 THP07101 528 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 GATMP50440 423 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 OVGP1Q12889 678 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 CCDC142Q17RM4 750 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 CLLU1OSQ5K130 101 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 PDSS2Q86YH6 399 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 LRRC43Q8N309 656 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 CCDC110Q8TBZ0 833 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 BTBD6Q96KE9 485 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 FAM161BQ96MY7 647 aa15.14■□□□□ 0.01
UBA1-202ENST00000377269 PCDHB18PQ96TA0 734 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms