RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 COQ4Q9Y3A0 265 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 NFE2L3Q9Y4A8 694 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 PCDHB9Q9Y5E1 797 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 ZFHX4Q86UP3 3567 aa19.32■□□□□ 0.68
HDAC6-202ENST00000376610 TOP3BO95985 862 aaKnown RBP19.31■□□□□ 0.68
HDAC6-202ENST00000376610 EPHX1P07099 455 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 SETSIPP0DME0 302 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 VDRP11473 427 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 NCAM1P13591 858 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 LRRC63Q05C16 580 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 STIM1Q13586 685 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 ENPP2Q13822 863 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 ZNF234Q14588 700 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 TRIP4Q15650 581 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-202ENST00000376610 COBLL1Q53SF7 1204 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 FAM217AQ8IXS0 508 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 CADM4Q8NFZ8 388 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 P2RY11Q96G91 374 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 ABCC13Q9NSE7 274 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 WSB2Q9NYS7 404 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-202ENST00000376610 USP36Q9P275 1121 aaKnown RBP19.31■□□□□ 0.68
HDAC6-202ENST00000376610 ZMIZ1Q9ULJ6 1067 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 NEUROG3Q9Y4Z2 214 aa19.31■□□□□ 0.68
HDAC6-202ENST00000376610 CKAP5Q14008 2032 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 A0A1B0GTW7 788 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 HYAL3O43820 417 aaPredicted RBP19.3■□□□□ 0.68
HDAC6-202ENST00000376610 TPMTP51580 245 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 LRMPQ12912 555 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 BSPRYQ5W0U4 402 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 KDF1Q8NAX2 398 aaPredicted RBP19.3■□□□□ 0.68
HDAC6-202ENST00000376610 OR2I1PQ8NGU4 316 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 WFIKKN2Q8TEU8 576 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 EDEM1Q92611 657 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 SMARCE1Q969G3 411 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 NUP58Q9BVL2 599 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 MIR1-1HGQ9H1L0 117 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 METTL14Q9HCE5 456 aaKnown RBP19.3■□□□□ 0.68
HDAC6-202ENST00000376610 PLA2G4CQ9UP65 541 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 CFAP47Q6ZTR5 3102 aa19.3■□□□□ 0.68
HDAC6-202ENST00000376610 TULP2O00295 520 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 TSPAN3O60637 253 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 LATS1O95835 1130 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 MAOBP27338 520 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 CETN1Q12798 172 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 ZNF423Q2M1K9 1284 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 FNDC3BQ53EP0 1204 aaKnown RBP19.29■□□□□ 0.68
HDAC6-202ENST00000376610 ANKRD40Q6AI12 368 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 CACUL1Q86Y37 369 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 FMR1NBQ8N0W7 255 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-202ENST00000376610 ZCCHC9Q8N567 271 aaKnown RBP19.29■□□□□ 0.68
HDAC6-202ENST00000376610 UBA3Q8TBC4 463 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 KCTD13Q8WZ19 329 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 DNASE2BQ8WZ79 361 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 NDRG1Q92597 394 aaKnown RBP19.29■□□□□ 0.68
HDAC6-202ENST00000376610 GOLGA1Q92805 767 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 TMA16Q96EY4 203 aaKnown RBP19.29■□□□□ 0.68
HDAC6-202ENST00000376610 CNGB3Q9NQW8 809 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 CLEC4EQ9ULY5 219 aa19.29■□□□□ 0.68
HDAC6-202ENST00000376610 ASPMQ8IZT6 3477 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 YJEFN3A6XGL0 299 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 E7ENQ6 273 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 PSMA7O14818 248 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 LCP1P13796 627 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 CD59P13987 128 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 HOXD9P28356 352 aaPredicted RBP19.28■□□□□ 0.68
HDAC6-202ENST00000376610 GRIK2Q13002 908 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 ADGRF1Q5T601 910 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 DCAF12L1Q5VU92 463 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 TMEM270Q6UE05 265 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 ZC3H3Q8IXZ2 948 aaKnown RBP19.28■□□□□ 0.68
HDAC6-202ENST00000376610 SORCS1Q8WY21 1168 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 GATA6Q92908 595 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 SLC35C1Q96A29 364 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 NT5C1BQ96P26 610 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 SFMBT1Q9UHJ3 866 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 MSRB2Q9Y3D2 182 aa19.28■□□□□ 0.68
HDAC6-202ENST00000376610 KCNJ18B7U540 433 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 O00370 1275 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 PAEPP09466 180 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 PRKCHP24723 683 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 COPAP53621 1224 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 STILQ15468 1287 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 TRIP6Q15654 476 aaKnown RBP19.27■□□□□ 0.68
HDAC6-202ENST00000376610 CCDC40Q4G0X9 1142 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 IL27RAQ6UWB1 636 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 BHLHA9Q7RTU4 235 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 UNC45BQ8IWX7 931 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 SCML4Q8N228 414 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 ZNF557Q8N988 423 aaPredicted RBP19.27■□□□□ 0.68
HDAC6-202ENST00000376610 OR2T3Q8NH03 318 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 ZCCHC14Q8WYQ9 949 aaKnown RBP19.27■□□□□ 0.68
HDAC6-202ENST00000376610 PCED1AQ9H1Q7 454 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 LHX5Q9H2C1 402 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 FBRSQ9HAH7 460 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 STOML2Q9UJZ1 356 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 PCDHB4Q9Y5E5 795 aa19.27■□□□□ 0.68
HDAC6-202ENST00000376610 TRIM49BA6NDI0 452 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 METTL12A8MUP2 240 aa19.26■□□□□ 0.67
HDAC6-202ENST00000376610 BCAT2O15382 392 aaPredicted RBP19.26■□□□□ 0.67
HDAC6-202ENST00000376610 SH3BP5O60239 455 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms