RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ANKRD20A2Q5SQ80 823 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 ANKRD20A1Q5TYW2 823 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 ANKRD20A3Q5VUR7 823 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 CDHR3Q6ZTQ4 885 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 NPY6RQ99463 290 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 ZFYVE28Q9HCC9 887 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 MAGED2Q9UNF1 606 aaPredicted RBP16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 NUP205Q92621 2012 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 GCATO75600 419 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 TOP3BO95985 862 aaKnown RBP16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 NOS2P35228 1153 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 SESN2P58004 480 aaPredicted RBP16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 TIGD5Q53EQ6 642 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 CYB5D1Q6P9G0 228 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 OTOAQ7RTW8 1153 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 SOCS4Q8WXH5 440 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 SLC13A1Q9BZW2 595 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 NPHS2Q9NP85 383 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 DCTN4Q9UJW0 460 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 IQANK1A0A1B0GTG1 560 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 WDR27A2RRH5 827 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 RNF103O00237 685 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 F7P08709 466 aaPredicted RBP16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 NCALDP61601 193 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 COLGALT1Q8NBJ5 622 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 P2RY11Q96G91 374 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 SIGLEC10Q96LC7 697 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 SENP6Q9GZR1 1112 aaPredicted RBP16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 PRDM12Q9H4Q4 367 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 PPCSQ9HAB8 311 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 Q9Y3F1 56 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 EEF2KO00418 725 aaKnown RBP16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 EDF1O60869 148 aaKnown RBP16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 B3GAT3O94766 335 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 ZWINTO95229 277 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 ZFXP17010 805 aaPredicted RBP16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 YY1P25490 414 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 NR2C2P49116 596 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 FLT3LGP49771 235 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 CAP1Q01518 475 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 RASA2Q15283 850 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 CES3Q6UWW8 571 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 LRRC6Q86X45 466 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 AGAP3Q96P47 875 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 OLFM3Q96PB7 478 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 TMEM209Q96SK2 561 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 FETUBQ9UGM5 382 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 PADI3Q9ULW8 664 aa16.5■□□□□ 0.23
CNKSR1-202ENST00000374253 LAMA2P24043 3122 aaKnown RBP16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 DGKIO75912 1065 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 NEFHP12036 1026 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 PSMB4P28070 264 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 SCNN1AP37088 669 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 MROH9Q5TGP6 573 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 ARCQ7LC44 396 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 SLC26A11Q86WA9 606 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 NCAPGQ9BPX3 1015 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 CD248Q9HCU0 757 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 CYLDQ9NQC7 956 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 DDIT4Q9NX09 232 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 STAP1Q9ULZ2 295 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 USP12O75317 370 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 DNAJC8O75937 253 aaPredicted RBP16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 APOEP02649 317 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 CYBAP13498 195 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 BDNFP23560 247 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 DAOAP59103 153 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 XRCC4Q13426 336 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 PAXIP1Q6ZW49 1069 aaPredicted RBP16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 ZNF276Q8N554 614 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 ERP27Q96DN0 273 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 MECRQ9BV79 373 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 MYLK2Q9H1R3 596 aa16.49■□□□□ 0.23
CNKSR1-202ENST00000374253 TTC3P53804 2025 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 BPTFQ12830 3046 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 A0A0A0MRY4 1105 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 IGHA2P01877 340 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 ITGB1P05556 798 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 ASGR1P07306 291 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 GJA9P57773 515 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 RFX8Q6ZV50 586 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 RSPH3Q86UC2 560 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 VSIG1Q86XK7 387 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 STKLD1Q8NE28 680 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 NT5C3BQ969T7 300 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 MYLPFQ96A32 169 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 SPATA13Q96N96 652 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 EBNA1BP2Q99848 306 aaKnown RBP16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 DNAI2Q9GZS0 605 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 RXFP1Q9HBX9 757 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 SLC38A7Q9NVC3 462 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 TMLHEQ9NVH6 421 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 STARD13Q9Y3M8 1113 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 H3BRJ5 948 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 ELNP15502 786 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 BGNP21810 368 aa16.48■□□□□ 0.23
CNKSR1-202ENST00000374253 SLC18A1P54219 525 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms