RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 HSP90AA5PQ58FG0 334 aa12.46□□□□□ -0.41
NCDN-202ENST00000373243 CGB2Q6NT52 195 aa12.46□□□□□ -0.41
NCDN-202ENST00000373243 KLHL35Q6PF15 583 aa12.46□□□□□ -0.41
NCDN-202ENST00000373243 WDR49Q8IV35 697 aa12.46□□□□□ -0.41
NCDN-202ENST00000373243 DEFB107AQ8IZN7 70 aa12.46□□□□□ -0.41
NCDN-202ENST00000373243 RYBPQ8N488 228 aaPredicted RBP12.46□□□□□ -0.41
NCDN-202ENST00000373243 ICA1LQ8NDH6 482 aa12.46□□□□□ -0.41
NCDN-202ENST00000373243 GSTCDQ8NEC7 633 aa12.46□□□□□ -0.41
NCDN-202ENST00000373243 RDM1Q8NG50 284 aa12.46□□□□□ -0.41
NCDN-202ENST00000373243 ZNF669Q96BR6 464 aaPredicted RBP12.46□□□□□ -0.41
NCDN-202ENST00000373243 MMP19Q99542 508 aa12.46□□□□□ -0.41
NCDN-202ENST00000373243 EIF2AQ9BY44 585 aaKnown RBP12.46□□□□□ -0.41
NCDN-202ENST00000373243 XAB2Q9HCS7 855 aaKnown RBP12.46□□□□□ -0.41
NCDN-202ENST00000373243 SAR1AQ9NR31 198 aa12.46□□□□□ -0.41
NCDN-202ENST00000373243 UBP1Q9NZI7 540 aa12.46□□□□□ -0.41
NCDN-202ENST00000373243 DRG1Q9Y295 367 aaKnown RBP12.46□□□□□ -0.41
NCDN-202ENST00000373243 APOC4-APOC2K7ER74 178 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 KCNK1O00180 336 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 DCXO43602 365 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 ASS1P00966 412 aaKnown RBP12.46□□□□□ -0.42
NCDN-202ENST00000373243 APOC2P02655 101 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 AMPD1P23109 780 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 NEK2P51955 445 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 NDST1P52848 882 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 COPAP53621 1224 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 AP3M2P53677 418 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 TMEM132DQ14C87 1099 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 GSTA3Q16772 222 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 RIPOR1Q6ZS17 1223 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 TMPRSS6Q8IU80 811 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 CDKL3Q8IVW4 592 aaPredicted RBP12.46□□□□□ -0.42
NCDN-202ENST00000373243 CEP295NLQ96MC4 621 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 NT5C1AQ9BXI3 368 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 TSPAN16Q9UKR8 245 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 GRID1Q9ULK0 1009 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 FNDC3AQ9Y2H6 1198 aaKnown RBP12.46□□□□□ -0.42
NCDN-202ENST00000373243 WDR27A2RRH5 827 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 PLSCR1O15162 318 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 RNASEH1O60930 286 aaKnown RBP12.46□□□□□ -0.42
NCDN-202ENST00000373243 MX2P20592 715 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 KLRC2P26717 231 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 GMPSP49915 693 aaPredicted RBP12.46□□□□□ -0.42
NCDN-202ENST00000373243 IYDQ6PHW0 289 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 LAYNQ6UX15 382 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 BBS12Q6ZW61 710 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 RBM15BQ8NDT2 890 aaKnown RBP12.46□□□□□ -0.42
NCDN-202ENST00000373243 C7orf43Q8WVR3 580 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 CNPY3Q9BT09 278 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 GTSE1Q9NYZ3 720 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 TAGLN3Q9UI15 199 aa12.46□□□□□ -0.42
NCDN-202ENST00000373243 PRPF4O43172 522 aaKnown RBP eCLIP12.45□□□□□ -0.42
NCDN-202ENST00000373243 GRIN3BO60391 1043 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 LYPLA2O95372 231 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 LSM8O95777 96 aaKnown RBP12.45□□□□□ -0.42
NCDN-202ENST00000373243 NFICP08651 508 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 ZBTB48P10074 688 aaPredicted RBP12.45□□□□□ -0.42
NCDN-202ENST00000373243 TGFB2P61812 414 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 INAQ16352 499 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 DCAF6Q58WW2 860 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 FAM47CQ5HY64 1035 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 MAP3K21Q5TCX8 1036 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 RWDD4Q6NW29 188 aaKnown RBP12.45□□□□□ -0.42
NCDN-202ENST00000373243 PPP1R14BQ96C90 147 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 TMEM176AQ96HP8 235 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 MRIQ9BWK5 157 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 SIK2Q9H0K1 926 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 EBF3Q9H4W6 596 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 ARHGAP28Q9P2N2 729 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 BCORQ6W2J9 1755 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 ZNF536O15090 1300 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 MT-CO1P00395 513 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 STAG3L1P0CL83 205 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 PORP16435 677 aaPredicted RBP12.45□□□□□ -0.42
NCDN-202ENST00000373243 PCYT1AP49585 367 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 NUDT2P50583 147 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 CNGA3Q16281 694 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 AZIN2Q96A70 460 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 KLK14Q9P0G3 267 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 SLC17A6Q9P2U8 582 aa12.45□□□□□ -0.42
NCDN-202ENST00000373243 A0A087WZ62 844 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 SIGLEC16A6NMB1 481 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 PHEXP78562 749 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 ATP1A4Q13733 1029 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 MXD4Q14582 209 aaPredicted RBP12.44□□□□□ -0.42
NCDN-202ENST00000373243 EFHC2Q5JST6 749 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 IER5Q5VY09 327 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 SCARA3Q6AZY7 606 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 SIX6OS1Q8N1H7 587 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 COPS5Q92905 334 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 USP13Q92995 863 aaPredicted RBP12.44□□□□□ -0.42
NCDN-202ENST00000373243 ECSITQ9BQ95 431 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 FDXACB1Q9BRP7 624 aaPredicted RBP12.44□□□□□ -0.42
NCDN-202ENST00000373243 B3GNT5Q9BYG0 378 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 ZNF518BQ9C0D4 1074 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 C2orf40Q9H1Z8 148 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 RNPEPQ9H4A4 650 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 ARMC7Q9H6L4 198 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 BFARQ9NZS9 450 aa12.44□□□□□ -0.42
NCDN-202ENST00000373243 FBXO9Q9UK97 447 aaPredicted RBP12.44□□□□□ -0.42
NCDN-202ENST00000373243 SPO11Q9Y5K1 396 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms