RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 SPECC1L-ADORA2AF8WAN1 911 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 NPTXRO95502 500 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 FGF3P11487 239 aaPredicted RBP13.15□□□□□ -0.3
CTPS1-202ENST00000372621 MLNP12872 115 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 CPOXP36551 454 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 ACTR3P61158 418 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 KDSRQ06136 332 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 MDH1BQ5I0G3 518 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 DEFB132Q7Z7B7 95 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 MYLK4Q86YV6 388 aaPredicted RBP13.15□□□□□ -0.3
CTPS1-202ENST00000372621 APLFQ8IW19 511 aaPredicted RBP13.15□□□□□ -0.3
CTPS1-202ENST00000372621 KBTBD2Q8IY47 623 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 CCDC33Q8N5R6 958 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 ACMSDQ8TDX5 336 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 MMP19Q99542 508 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 MORF4L1Q9UBU8 362 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 SLC7A8Q9UHI5 535 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 AP4E1Q9UPM8 1137 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 WDR27A2RRH5 827 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 PRKCGP05129 697 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 SKIP12755 728 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 GRM5P41594 1212 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 ALDH18A1P54886 795 aaKnown RBP13.15□□□□□ -0.3
CTPS1-202ENST00000372621 KCTD2Q14681 263 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 TRMT5Q32P41 509 aaKnown RBP13.15□□□□□ -0.3
CTPS1-202ENST00000372621 DNAL1Q4LDG9 190 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 FASTKD1Q53R41 847 aaKnown RBP13.15□□□□□ -0.3
CTPS1-202ENST00000372621 RABGAP1LQ5R372 815 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 TEDDM1Q5T9Z0 273 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 ARHGAP17Q68EM7 881 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 TMEM154Q6P9G4 183 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 SLC24A3Q9HC58 644 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 MFHAS1Q9Y4C4 1052 aa13.15□□□□□ -0.3
CTPS1-202ENST00000372621 SPDYE5A6NIY4 337 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 A6NJR5 290 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 ITM2AO43736 263 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 DESP17661 470 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 SCNN1AP37088 669 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 UBAP2LQ14157 1087 aaKnown RBP13.15□□□□□ -0.31
CTPS1-202ENST00000372621 SOWAHAQ2M3V2 549 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 HEATR6Q6AI08 1181 aaKnown RBP13.15□□□□□ -0.31
CTPS1-202ENST00000372621 ATG14Q6ZNE5 492 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 RIPOR1Q6ZS17 1223 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 CCDC185Q8N715 623 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 HTR3CQ8WXA8 447 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 ARNTL2Q8WYA1 636 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 CLPTM1LQ96KA5 538 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 ZMAT2Q96NC0 199 aaKnown RBP13.15□□□□□ -0.31
CTPS1-202ENST00000372621 LPIN3Q9BQK8 851 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 SLC17A6Q9P2U8 582 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 SNX9Q9Y5X1 595 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 NR2E3Q9Y5X4 410 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 CSADQ9Y600 493 aa13.15□□□□□ -0.31
CTPS1-202ENST00000372621 PDCD11Q14690 1871 aaKnown RBP13.14□□□□□ -0.31
CTPS1-202ENST00000372621 ZBTB7AO95365 584 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 SP100P23497 879 aaPredicted RBP13.14□□□□□ -0.31
CTPS1-202ENST00000372621 SNX16P57768 344 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 PDE1CQ14123 709 aaPredicted RBP13.14□□□□□ -0.31
CTPS1-202ENST00000372621 RCN2Q14257 317 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 ZBTB6Q15916 424 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 OR52E8Q6IFG1 317 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 LRRC8BQ6P9F7 803 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 DENND5BQ6ZUT9 1274 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 PIWIL2Q8TC59 973 aaKnown RBP13.14□□□□□ -0.31
CTPS1-202ENST00000372621 IFT43Q96FT9 208 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 STN1Q9H668 368 aaKnown RBP13.14□□□□□ -0.31
CTPS1-202ENST00000372621 DNAJB4Q9UDY4 337 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 ASB3Q9Y575 518 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 A0A0A0MRY4 1105 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 MTHFD1LQ6UB35 978 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 MAMDC4Q6UXC1 1216 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 PACS1Q6VY07 963 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 RFX8Q6ZV50 586 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 GATA6Q92908 595 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 SPATA13Q96N96 652 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 ZNF184Q99676 751 aaPredicted RBP13.14□□□□□ -0.31
CTPS1-202ENST00000372621 DPEP3Q9H4B8 488 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 EIF2B3Q9NR50 452 aaKnown RBP13.14□□□□□ -0.31
CTPS1-202ENST00000372621 DDX43Q9NXZ2 648 aaKnown RBP13.14□□□□□ -0.31
CTPS1-202ENST00000372621 DERAQ9Y315 318 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 COL1A2P08123 1366 aa13.14□□□□□ -0.31
CTPS1-202ENST00000372621 HACD1B0YJ81 288 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 PLIN3O60664 434 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 LYPLA1O75608 230 aaPredicted RBP13.13□□□□□ -0.31
CTPS1-202ENST00000372621 ANPEPP15144 967 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 FDFT1P37268 417 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 SARNPP82979 210 aaKnown RBP13.13□□□□□ -0.31
CTPS1-202ENST00000372621 PCLAFQ15004 111 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 GJC2Q5T442 439 aaPredicted RBP13.13□□□□□ -0.31
CTPS1-202ENST00000372621 C16orf46Q6P387 395 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 MAVSQ7Z434 540 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 UNC93AQ86WB7 457 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 C7orf31Q8N865 590 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 TFB1MQ8WVM0 346 aaKnown RBP13.13□□□□□ -0.31
CTPS1-202ENST00000372621 THTPAQ9BU02 230 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 XPNPEP3Q9NQH7 507 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 A0A088AWK7 358 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 TPP1O14773 563 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 MAP3K13O43283 966 aa13.13□□□□□ -0.31
CTPS1-202ENST00000372621 MAP3K7O43318 606 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms